RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 SUSD5O60279 629 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 TRIM3O75382 744 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-201ENST00000343916 PGCP20142 388 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 ALOX5APP20292 161 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 CENPAP49450 140 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 MRPL28Q13084 256 aaKnown RBP17.5■□□□□ 0.39
COL9A3-201ENST00000343916 BICRALQ6AI39 1079 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 SLC35D2Q76EJ3 337 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 LINGO2Q7L985 606 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 DUSP19Q8WTR2 217 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 METTL21AQ8WXB1 218 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 ATOH1Q92858 354 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-201ENST00000343916 DPAGT1Q9H3H5 408 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 C12orf10Q9HB07 376 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 ATXN7L1Q9ULK2 861 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-201ENST00000343916 TO15178 435 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 TSC22D2O75157 780 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 HLA-DQA2P01906 255 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 PTHLHP12272 177 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 GP1BBP13224 206 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 ADRA2CP18825 462 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 DPP4P27487 766 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 Q499Y3 187 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 PHYHIPQ92561 330 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 TCF7L1Q9HCS4 588 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 SLC22A11Q9NSA0 550 aa17.5■□□□□ 0.39
COL9A3-201ENST00000343916 A0A1W2PQD3 144 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ITGA10O75578 1167 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 CRYZL1O95825 349 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 BTG1P62324 171 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 DMWDQ09019 674 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 CBFBQ13951 182 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 FCN2Q15485 313 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ACKR1Q16570 336 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 FAM205BPQ63HN1 556 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 GPR139Q6DWJ6 353 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 KCTD20Q7Z5Y7 419 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ADGRG3Q86Y34 549 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 OR8K3Q8NH51 312 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 NSMAFQ92636 917 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 INTS14Q96SY0 518 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 NPAS1Q99742 590 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 CACNG6Q9BXT2 260 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 NUP210LQ5VU65 1888 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 TMED7-TICAM2A0A0A6YYA0 188 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 TRABD2BA6NFA1 517 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 XKRYO14609 159 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 PDCD5O14737 125 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 EIF4E2O60573 245 aaKnown RBP17.49■□□□□ 0.39
COL9A3-201ENST00000343916 GDNFP39905 211 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 OR3A3P47888 321 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 PNLIPRP2P54317 469 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 RPS15P62841 145 aaKnown RBP17.49■□□□□ 0.39
COL9A3-201ENST00000343916 MAB21L1Q13394 359 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ETFDHQ16134 617 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ZNF441Q8N8Z8 693 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 SLC38A9Q8NBW4 561 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 OR2G2Q8NGZ5 317 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 SMIM4Q8WVI0 70 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 KLHL15Q96M94 604 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 SLCO1C1Q9NYB5 712 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 TMED7Q9Y3B3 224 aa17.49■□□□□ 0.39
COL9A3-201ENST00000343916 COL5A1P20908 1838 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-201ENST00000343916 ZNF354AO60765 605 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-201ENST00000343916 MAS1P04201 325 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 C19orf57Q0VDD7 668 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 LRRN1Q6UXK5 716 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 COX15Q7KZN9 410 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 MAMDC2Q7Z304 686 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-201ENST00000343916 NUP54Q7Z3B4 507 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 ELMOD2Q8IZ81 293 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 KDM8Q8N371 416 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 ADAMTS14Q8WXS8 1223 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 PHF21AQ96BD5 680 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 GTPBP2Q9BX10 602 aaKnown RBP17.48■□□□□ 0.39
COL9A3-201ENST00000343916 SLC7A5P2Q9GIP4 190 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 TRAV8-7A0A075B6U6 113 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 FADS1O60427 444 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 ICMTO60725 284 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 DHFRP00374 187 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 SYPP08247 313 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 P2RX1P51575 399 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 STARD6P59095 220 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 SNTB2Q13425 540 aaKnown RBP17.48■□□□□ 0.39
COL9A3-201ENST00000343916 FAM69AQ5T7M9 428 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 HACD4Q5VWC8 232 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 PRSS35Q8N3Z0 413 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 STT3BQ8TCJ2 826 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 DNASE2BQ8WZ79 361 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 CCDC74AQ96AQ1 378 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 OR5V1Q9UGF6 321 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 SLC23A1Q9UHI7 598 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 DMDP11532 3685 aa17.48■□□□□ 0.39
COL9A3-201ENST00000343916 FRYLO94915 3013 aa17.47■□□□□ 0.39
COL9A3-201ENST00000343916 OR4C45A6NMZ5 311 aa17.47■□□□□ 0.39
COL9A3-201ENST00000343916 TPD52L2O43399 206 aaKnown RBP17.47■□□□□ 0.39
COL9A3-201ENST00000343916 RAD1O60671 282 aa17.47■□□□□ 0.39
COL9A3-201ENST00000343916 KLF9Q13886 244 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-201ENST00000343916 MELKQ14680 651 aa17.47■□□□□ 0.39
COL9A3-201ENST00000343916 SGCBQ16585 318 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms