RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR52I2Q8NH67 350 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 DEDD2Q8WXF8 326 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 PMEPA1Q969W9 287 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 MS4A3Q96HJ5 214 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 SLC7A5P2Q9GIP4 190 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 SLITRK2Q9H156 845 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 NIPAL2Q9H841 368 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 SLCO1C1Q9NYB5 712 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 OR5V1Q9UGF6 321 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 TRAV8-7A0A075B6U6 113 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 A0A1B0GX78 115 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 ALG1L2C9J202 215 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 PGCP20142 388 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 KLF9Q13886 244 aaPredicted RBP13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 MELKQ14680 651 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 ACKR1Q16570 336 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 EMC4Q5J8M3 183 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 EEF1A1P5Q5VTE0 462 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 D2HGDHQ8N465 521 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 OR1N1Q8NGS0 311 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 OR2G2Q8NGZ5 317 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 C1orf216Q8TAB5 229 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 GIMAP1Q8WWP7 306 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 SCMH1Q96GD3 660 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 NKX3-1Q99801 234 aaPredicted RBP13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 OR51J1Q9H342 316 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 GHITMQ9H3K2 345 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 KLK11Q9UBX7 282 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 FLVCR2Q9UPI3 526 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 FKBP7Q9Y680 259 aa13.47□□□□□ -0.25
VIPAS39-202ENST00000343765 TMED7-TICAM2A0A0A6YYA0 188 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 CCDC85CA6NKD9 419 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 H0YC42 278 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 ALOX5APP20292 161 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 DCAF7P61962 342 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 ETFDHQ16134 617 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 KCTD20Q7Z5Y7 419 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 PHYHIPQ92561 330 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 TMEM106AQ96A25 262 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 PTDSS2Q9BVG9 487 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 ATXN7L1Q9ULK2 861 aaPredicted RBP13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 TMED7Q9Y3B3 224 aa13.46□□□□□ -0.25
VIPAS39-202ENST00000343765 ANXA2P2A6NMY6 339 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 NUDT21O43809 227 aaKnown RBP13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 GMDSO60547 372 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC16A7O60669 478 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 H2AFB2P0C5Z0 115 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 CXCL3P19876 107 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 PLA2G7Q13093 441 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 CBFBQ13951 182 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 TMEM255AQ5JRV8 349 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 GPR139Q6DWJ6 353 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 FAAP20Q6NZ36 180 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 PRSS35Q8N3Z0 413 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 MFRPQ9BY79 579 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 SPARCP09486 303 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 MEP1BQ16820 701 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 LAMTOR1Q6IAA8 161 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 PWWP2BQ6NUJ5 590 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 BAIAP2L2Q6UXY1 529 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 SIX5Q8N196 739 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 NPAS1Q99742 590 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 COMMD4Q9H0A8 199 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 C7orf66A4D0T2 115 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 OR4C45A6NMZ5 311 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF593O00488 134 aaPredicted RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 FBXO45P0C2W1 286 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 IL11P20809 199 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 CDK2P24941 298 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 TNK1Q13470 666 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 TSEN15Q8WW01 171 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 PPP1R14AQ96A00 147 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 CCDC74AQ96AQ1 378 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 GTPBP2Q9BX10 602 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 ELOVL3Q9HB03 270 aa13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 MRPS17Q9Y2R5 130 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-202ENST00000343765 ANKRD34BA5PLL1 514 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 BCAT2O15382 392 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 GSTZ1O43708 216 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 EIF4E2O60573 245 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 OR6A2O95222 327 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 GLB1P16278 677 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 POLR2HP52434 150 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 C1orf140Q5VVS0 124 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 ADGRG3Q86Y34 549 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 LIX1LQ8IVB5 337 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF417Q8TAU3 575 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 S100A16Q96FQ6 103 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC41A2Q96JW4 573 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms