RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 USF3Q68DE3 2245 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 NPIPB13A6NJU9 1138 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 NPIPB4C9JG80 1138 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 C11orf98E9PRG8 122 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 ATP6V1G2-DDX39BF2Z307 99 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 H7C417 338 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 CXCR6O00574 342 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 NME4O00746 187 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 OR7A10O76100 309 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 IFNW1P05000 195 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 HEXAP06865 529 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 IFNGR1P15260 489 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 TNFRSF1BP20333 461 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 OR1E2P47887 323 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 DAP3P51398 398 aaKnown RBP11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 BIDP55957 195 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 DSCR9P59020 149 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 NAAAQ02083 359 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 PIN1Q13526 163 aaPredicted RBP11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 CAMK2DQ13557 499 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 CLEC9AQ6UXN8 241 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC46A3Q7Z3Q1 461 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 ZNF566Q969W8 418 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 SGTBQ96EQ0 304 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC25A44Q96H78 314 aaPredicted RBP11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 TXNDC15Q96J42 360 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 RAB3IPQ96QF0 476 aaPredicted RBP11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 CACNG6Q9BXT2 260 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 SPAG4Q9NPE6 437 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 GLTPQ9NZD2 209 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 ABCD2Q9UBJ2 740 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 MOKQ9UQ07 419 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 PMF1-BGLAPU3KQ54 211 aa11.61□□□□□ -0.55
SIRPB3P-201ENST00000340424 A0A1W2PRG6 482 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 TRIM64A6NGJ6 449 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 TRIM64BA6NI03 449 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 SERPINI2O75830 405 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 BCL10O95999 233 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 IGHV4-39P01824 125 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 IGHG1P01857 330 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 CECR9P0C854 216 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 NR2C1P13056 603 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 UGT2B15P54855 530 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 TAF11Q15544 211 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 IFI44LQ53G44 452 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 PHYHD1Q5SRE7 291 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 ZNF813Q6ZN06 617 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 DNM1P46Q6ZS02 220 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 CBLL1Q75N03 491 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 PIWIL3Q7Z3Z3 882 aaKnown RBP11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 DPPA2Q7Z7J5 298 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 NKAIN4Q8IVV8 208 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 OFCC1Q8IZS5 231 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 TMEM54Q969K7 222 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 MYCBPQ99417 103 aaPredicted RBP11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 FOXB1Q99853 325 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 KCTD14Q9BQ13 255 aaPredicted RBP11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 GSX1Q9H4S2 264 aaPredicted RBP11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 CA10Q9NS85 328 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 RPS6KA6Q9UK32 745 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 A4GNTQ9UNA3 340 aa11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
SIRPB3P-201ENST00000340424 BLOC1S5-TXNDC5H3BN57 136 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 UBL3O95164 117 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 CSF3P09919 207 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 FUT1P19526 365 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 CAPZA2P47755 286 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 GSK3BP49841 420 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 NUDT6P53370 316 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 PSME3P61289 254 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 RPL18Q07020 188 aaKnown RBP11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 TNK1Q13470 666 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 RAB35Q15286 201 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 GSG1Q2KHT4 349 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 KRTAP21-3Q3LHN1 58 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 ANKDD1AQ495B1 522 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 CYP4Z1Q86W10 505 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 RNF113BQ8IZP6 322 aaKnown RBP11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 PFN4Q8NHR9 129 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 ZNF837Q96EG3 531 aaPredicted RBP11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 FNDC11Q9BVV2 318 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 INIPQ9NRY2 104 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 B3GNT2Q9NY97 397 aa11.59□□□□□ -0.55
SIRPB3P-201ENST00000340424 NSD1Q96L73 2696 aaPredicted RBP11.58□□□□□ -0.56
SIRPB3P-201ENST00000340424 B9A039 149 aa11.58□□□□□ -0.56
SIRPB3P-201ENST00000340424 MCIDASD6RGH6 385 aa11.58□□□□□ -0.56
SIRPB3P-201ENST00000340424 GMNNO75496 209 aa11.58□□□□□ -0.56
SIRPB3P-201ENST00000340424 FARS2O95363 451 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms