RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PUDPQ08623 228 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 MAD2L1BPQ15013 274 aaPredicted RBP13.42□□□□□ -0.26
LINC01116-202ENST00000339037 MS4A18Q3C1V0 323 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 FAM91A1Q658Y4 838 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 DEF8Q6ZN54 512 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 CARM1Q86X55 608 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 OR6S1Q8NH40 331 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 RNF217Q8TC41 542 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 SLC41A3Q96GZ6 507 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 ASPNQ9BXN1 380 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 DENND2DQ9H6A0 471 aaPredicted RBP13.42□□□□□ -0.26
LINC01116-202ENST00000339037 MED29Q9NX70 200 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 FZR1Q9UM11 496 aa13.42□□□□□ -0.26
LINC01116-202ENST00000339037 A0A1W2PPW3 197 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF726A6NNF4 738 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 FAM157AC9JC47 383 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 UBL3O95164 117 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 COL8A2P25067 703 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 LSP1P33241 339 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 SEC24CP53992 1094 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 TMEM33P57088 247 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 RAB1AP62820 205 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 ACTG1P63261 375 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 MRPS11P82912 194 aaKnown RBP13.41□□□□□ -0.26
LINC01116-202ENST00000339037 PMS2P3Q13401 168 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 FXNQ16595 210 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 AGKQ53H12 422 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 GCNT6Q5T4J0 391 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 LRP11Q86VZ4 500 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 KRT73Q86Y46 540 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 DYDC1Q8WWB3 177 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 SLC47A1Q96FL8 570 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 TXNDC15Q96J42 360 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 FOXB1Q99853 325 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 RACGAP1Q9H0H5 632 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF275Q9NSD4 429 aaPredicted RBP13.41□□□□□ -0.26
LINC01116-202ENST00000339037 TREM2Q9NZC2 230 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 MYEF2Q9P2K5 600 aaKnown RBP13.41□□□□□ -0.26
LINC01116-202ENST00000339037 TESQ9UGI8 421 aaKnown RBP13.41□□□□□ -0.26
LINC01116-202ENST00000339037 DUSP13Q9UII6 198 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 FBXL3Q9UKT7 428 aa13.41□□□□□ -0.26
LINC01116-202ENST00000339037 PPIHO43447 177 aaKnown RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 TPST1O60507 370 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 SERPINI2O75830 405 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 BGLAPP02818 100 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 GAAP10253 952 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 NAT2P11245 290 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 AHCYP23526 432 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 RGS8P57771 180 aaPredicted RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 CDK6Q00534 326 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 REEP3Q6NUK4 255 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 DHRS4L2Q6PKH6 230 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 PXKQ7Z7A4 578 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 C10orf53Q8N6V4 93 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 OR51F2Q8NH61 342 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF418Q8TF45 676 aaPredicted RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 MOGAT1Q96PD6 335 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 LRRC37BQ96QE4 947 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF416Q9BWM5 594 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
LINC01116-202ENST00000339037 GMEB1Q9Y692 573 aa13.4□□□□□ -0.26
LINC01116-202ENST00000339037 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 A0A1B0GX12 115 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 WNT9BO14905 357 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 RGS9O75916 674 aaPredicted RBP13.39□□□□□ -0.27
LINC01116-202ENST00000339037 NCR1O76036 304 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
LINC01116-202ENST00000339037 CSNK1A1P48729 337 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 ATP4BP51164 291 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 RAB39AQ14964 217 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 NKPD1Q17RQ9 610 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
LINC01116-202ENST00000339037 NHLRC1Q6VVB1 395 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 WDFY1Q8IWB7 410 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 YIPF5Q969M3 257 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 TMEM27Q9HBJ8 222 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
LINC01116-202ENST00000339037 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 SLC13A4Q9UKG4 626 aa13.39□□□□□ -0.27
LINC01116-202ENST00000339037 TRAV20A0A0B4J274 112 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 PRORSD1PA6NEY8 169 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 PLPP3O14495 311 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 SPRY1O43609 319 aaPredicted RBP13.38□□□□□ -0.27
LINC01116-202ENST00000339037 RP2O75695 350 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 PNPP00491 289 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 SERPINA5P05154 406 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 GPX2P18283 190 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 AQP1P29972 269 aa13.38□□□□□ -0.27
LINC01116-202ENST00000339037 LMO4P61968 165 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms