RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FNDC11Q9BVV2 318 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 NDUFAF4Q9P032 175 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 RPS6KA6Q9UK32 745 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 KIAA1324LA8MWY0 1029 aaPredicted RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 SEMG1P04279 462 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 CELA3BP08861 270 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 IFI30P13284 250 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 VLDLRP98155 873 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 PRKCDQ05655 676 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 SAMD4BQ5PRF9 694 aaKnown RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 GKAP1Q5VSY0 366 aaPredicted RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 DEFB107AQ8IZN7 70 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 OR6N1Q8NGY5 312 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 MRPL13Q9BYD1 178 aaKnown RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 ULBP2Q9BZM5 246 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 CXorf56Q9H5V9 222 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
PRKN-201ENST00000338468 NOX3Q9HBY0 568 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 B3GNT2Q9NY97 397 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 ZNF224Q9NZL3 707 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 MOKQ9UQ07 419 aa13.28□□□□□ -0.28
PRKN-201ENST00000338468 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.28
PRKN-201ENST00000338468 ARPC2O15144 300 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ARHGEF9O43307 516 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 BCL10O95999 233 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 CECR9P0C854 216 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 T-ENOLP0DO92 83 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 CBR1P16152 277 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 IFNA8P32881 189 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 TTKP33981 857 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 CDKN1AP38936 164 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 HIST3H3Q16695 136 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 C3orf36Q3SXR2 165 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ARMC4Q5T2S8 1044 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 C11orf71Q6IPW1 123 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ZNF813Q6ZN06 617 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 MBOAT2Q6ZWT7 520 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
PRKN-201ENST00000338468 LRRC75AQ8NAA5 344 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 CCDC197Q8NCU1 140 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 SLC7A13Q8TCU3 470 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
PRKN-201ENST00000338468 ZNF566Q969W8 418 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ZNF75AQ96N20 296 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 DHRS9Q9BPW9 319 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 GRIP2Q9C0E4 1043 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 B3GAT2Q9NPZ5 323 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 INIPQ9NRY2 104 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 ADAM21Q9UKJ8 722 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.29
PRKN-201ENST00000338468 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.29
PRKN-201ENST00000338468 HTR3EA5X5Y0 456 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 hCG_2039718K7EN88 272 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 CDC42EP2O14613 210 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 TRMUO75648 421 aaKnown RBP13.26□□□□□ -0.29
PRKN-201ENST00000338468 DIRAS1O95057 198 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 LY6G6DO95868 133 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 HLA-HP01893 362 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 B4GALT1P15291 398 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 ZNF26P17031 533 aaPredicted RBP13.26□□□□□ -0.29
PRKN-201ENST00000338468 PAX7P23759 505 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 PCSK6P29122 969 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 CALCRP30988 508 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 NAAAQ02083 359 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 PODNL1Q6PEZ8 512 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 C16orf89Q6UX73 402 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 MDP1Q86V88 176 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 RNF113BQ8IZP6 322 aaKnown RBP13.26□□□□□ -0.29
PRKN-201ENST00000338468 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 NMD3Q96D46 503 aaKnown RBP13.26□□□□□ -0.29
PRKN-201ENST00000338468 NSL1Q96IY1 281 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 COX4I2Q96KJ9 171 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 DHRS1Q96LJ7 313 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 ZNF347Q96SE7 839 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 FOXB1Q99853 325 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 FUZQ9BT04 418 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 KATNB1Q9BVA0 655 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 ANKRD19PQ9H560 264 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 POU2F3Q9UKI9 436 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 POFUT2Q9Y2G5 429 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 V9GYQ6 96 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 COL6A5A8TX70 2615 aa13.26□□□□□ -0.29
PRKN-201ENST00000338468 TRAV27A0A087WT01 109 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 A0A1W2PRG6 482 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 A0A1W2PRQ8 180 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 NPIPB13A6NJU9 1138 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 B2RBV5 119 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 NPIPB4C9JG80 1138 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 NDUFS7O75251 213 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms