RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 H3BSA7 217 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 J3QRE1 110 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SBK2P0C263 348 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PSMB9P28065 219 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LINC01590Q5TEZ4 76 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RNLSQ5VYX0 342 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FAM205BPQ63HN1 556 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LYPD4Q6UWN0 246 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 Q6ZS92 163 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ASB18Q6ZVZ8 466 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LHFPL3Q86UP9 236 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR13F1Q8NGS4 319 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SMAP2Q8WU79 429 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CRELD1Q96HD1 420 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TBX5Q99593 518 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ALG12Q9BV10 488 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TIGARQ9NQ88 270 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MOKQ9UQ07 419 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 C1QTNF9BB2RNN3 333 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 VAMP5O95183 116 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ACTL6AO96019 429 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IGHA1P01876 353 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 C1QTNF9P0C862 333 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PAX7P23759 505 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 UCNP55089 124 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MED22Q15528 200 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MEIOBQ8N635 442 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RBMXL3Q8N7X1 1067 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR5M11Q96RB7 305 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 B9D1Q9UPM9 204 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EXOSC1Q9Y3B2 195 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MGAQ8IWI9 3026 aa13.15□□□□□ -0.3
CDK5RAP3-201ENST00000338399 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NPIPA2E9PIF3 369 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NPIPA3F8WFD2 350 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MYL12BO14950 172 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SLC16A7O60669 478 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CTLA4P16410 223 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NAA10P41227 235 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CLDN17P56750 224 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 POU4F2Q12837 409 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CAMK2DQ13557 499 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GGTLC2Q14390 218 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SLC17A1Q14916 467 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 POU4F3Q15319 338 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 C3AR1Q16581 482 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SYT6Q5T7P8 510 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF511Q8NB15 262 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR9K2Q8NGE7 335 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NDUFA13Q9P0J0 144 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SPRR3Q9UBC9 169 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PCDHGB7Q9Y5F8 929 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FKBP7Q9Y680 259 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TAF4O00268 1085 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SELENOFO60613 162 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GPANK1O95872 356 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LIMS3P0CW19 117 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LIMS4P0CW20 117 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TTKP33981 857 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 HCCSP53701 268 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RPS3AP61247 264 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CXADRP78310 365 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FMODQ06828 376 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 DOC2BQ14184 412 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ETFDHQ16134 617 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 BCL2A1Q16548 175 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF367Q7RTV3 350 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SLC25A44Q96H78 314 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TAAR6Q96RI8 345 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CNN2Q99439 309 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TIMP4Q99727 224 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF649Q9BS31 505 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RBM38Q9H0Z9 239 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms