RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FLNBO75369 2602 aaKnown RBP13.57□□□□□ -0.24
SEC13-201ENST00000337354 KIAA1549Q9HCM3 1950 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 PDLIM1O00151 329 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 XKRYO14609 159 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 TRMUO75648 421 aaKnown RBP13.56□□□□□ -0.24
SEC13-201ENST00000337354 PGA4P0DJD7 388 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 PGA3P0DJD8 388 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 COX5AP20674 150 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 UGT2B10P36537 528 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 ACVR1BP36896 505 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 DAPP51397 102 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 STAC2Q6ZMT1 411 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 SSX8Q7RTT4 187 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 STEAP2Q8NFT2 490 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 TSPAN32Q96QS1 320 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 RBP7Q96R05 134 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
SEC13-201ENST00000337354 ALG12Q9BV10 488 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
SEC13-201ENST00000337354 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 DCLRE1BQ9H816 532 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 PAPOLBQ9NRJ5 636 aaKnown RBP13.56□□□□□ -0.24
SEC13-201ENST00000337354 GLTPQ9NZD2 209 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 REV1Q9UBZ9 1251 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 IL20RAQ9UHF4 553 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 ADAM18Q9Y3Q7 739 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 IER3IP1Q9Y5U9 82 aa13.56□□□□□ -0.24
SEC13-201ENST00000337354 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 H0YHG0 523 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 H3BN98 237 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 PPP3CBP16298 524 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 IGHV1-2P23083 117 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 NOS3P29474 1203 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 CLRN1P58418 232 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 ROR2Q01974 943 aaKnown RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 TOP3AQ13472 1001 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 THEM4Q5T1C6 240 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 CARD17Q5XLA6 110 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 KDM4DQ6B0I6 523 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 ADCK1Q86TW2 530 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 CXorf67Q86X51 503 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 OR2T33Q8NG76 320 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 TEX47Q8TBZ9 253 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 KISS1RQ969F8 398 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 Q96M85 177 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 MUS81Q96NY9 551 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 ERMAPQ96PL5 475 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 TSSK6Q9BXA6 273 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 ULBP2Q9BZM5 246 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 CRLF2Q9HC73 371 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
SEC13-201ENST00000337354 NDRG3Q9UGV2 375 aa13.55□□□□□ -0.24
SEC13-201ENST00000337354 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 M0R3G1 203 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 BHLHE40O14503 412 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 ARHGEF9O43307 516 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 TP53P04637 393 aaPredicted RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 ANPEPP15144 967 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 IL32P24001 234 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 COL8A1P27658 744 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 GIPRP48546 466 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 ESRRGP62508 458 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 RUNX1T1Q06455 604 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 RCN1Q15293 331 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 SLC36A3Q495N2 470 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 CLEC12AQ5QGZ9 265 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 LNX2Q8N448 690 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 NOXO1Q8NFA2 376 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 HDAC2Q92769 488 aaKnown RBP13.54□□□□□ -0.24
SEC13-201ENST00000337354 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 TBC1D23Q9NUY8 699 aa13.54□□□□□ -0.24
SEC13-201ENST00000337354 SETXQ7Z333 2677 aaKnown RBP13.53□□□□□ -0.24
SEC13-201ENST00000337354 TEX13CA0A0J9YWL9 993 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 CIB4A0PJX0 185 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 MGRN1O60291 552 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 SOX14O95416 240 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 PPP1R3DO95685 299 aa13.53□□□□□ -0.24
SEC13-201ENST00000337354 QDPRP09417 244 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms