RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 UBE2NLQ5JXB2 153 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 BCL2L15Q5TBC7 163 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 YOD1Q5VVQ6 348 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 TMEM71Q6P5X7 295 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC35D2Q76EJ3 337 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SIAH3Q8IW03 269 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 APCDD1LQ8NCL9 501 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 ATOH1Q92858 354 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 FREM3P0C091 2139 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 A8MVM7 634 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SOX1O00570 391 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 RGS13O14921 159 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 ITGA10O75578 1167 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 FAM199XQ6PEV8 388 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 PRR23CQ6ZRP0 262 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 FCRLAQ7L513 359 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SERPINA12Q8IW75 414 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 OR51A4Q8NGJ6 313 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 OR2G2Q8NGZ5 317 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 NSMAFQ92636 917 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 ULBP3Q9BZM4 244 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SLCO1C1Q9NYB5 712 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 SRPK3Q9UPE1 567 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 CAMK2AQ9UQM7 478 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 PRSS37A4D1T9 235 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 A6NL46 340 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 PDCD5O14737 125 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 MT-ATP6P00846 226 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 IL11P20809 199 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 DHPSP49366 369 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 RPL27P61353 136 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 RRAS2P62070 204 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 PITPNAQ00169 270 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 MELKQ14680 651 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ETFDHQ16134 617 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 STAC2Q6ZMT1 411 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 GRINAQ7Z429 371 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ANKRD37Q7Z713 158 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 KDM8Q8N371 416 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF417Q8TAU3 575 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC25A38Q96DW6 304 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF587Q96SQ5 575 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 V9GY05 133 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 TMEM265A0A087WTH1 108 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 OR4C45A6NMZ5 311 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC16A7O60669 478 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 HEXBP07686 556 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 YES1P07947 543 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ADRA2CP18825 462 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 GIFP27352 417 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 DPP4P27487 766 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 INSM1Q01101 510 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 CDK10Q15131 360 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 NKAIN1Q4KMZ8 207 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 TCTE3Q8IZS6 198 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF519Q8TB69 540 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 TCF7L1Q9HCS4 588 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 ITGB1BP2Q9UKP3 347 aa13.41□□□□□ -0.26
CLCNKA-201ENST00000331433 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 A0A1W2PQM1 296 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 SMLR1H3BR10 107 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF593O00488 134 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 ANKRD34CP0C6C1 535 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 HLA-DOBP13765 273 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 PWWP2BQ6NUJ5 590 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 LINGO2Q7L985 606 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 OTOSQ8NHW6 89 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 TRAV8-7A0A075B6U6 113 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 TRBV5-5A0A0J9YX44 114 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 FAM172BPA6NC97 362 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 OR6A2O95222 327 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 MT-ND4P03905 459 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 CTLA4P16410 223 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 EPHA8P29322 1005 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 CCR6P51684 374 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 EGR3Q06889 387 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 EFR3AQ14156 821 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 Q5BKY6 102 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 HACD4Q5VWC8 232 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 BICRALQ6AI39 1079 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 AKAP1Q92667 903 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 SEMA4CQ9C0C4 833 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 DPAGT1Q9H3H5 408 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms