RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 C2orf72A6NCS6 295 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 CENPBD1B2RD01 187 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 FTCDNL1E5RQL4 147 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 TFECO14948 347 aaPredicted RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 CDRT1O95170 752 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 APOL3O95236 402 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 RFPL3SP0C7P2 107 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 ASAH2BP0C7U1 165 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 IFI30P13284 250 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 RAC3P60763 192 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 MXD1Q05195 221 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 SGCBQ16585 318 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 RAET1LQ5VY80 246 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 FAM205BPQ63HN1 556 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 SLC6A19Q695T7 634 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 ZNF324BQ6AW86 544 aaPredicted RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 PRICKLE2Q7Z3G6 844 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 HDDC2Q7Z4H3 204 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 MEX3DQ86XN8 651 aaKnown RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 OR8D4Q8NGM9 314 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 SARAFQ96BY9 339 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 KLHL15Q96M94 604 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 SF3B5Q9BWJ5 86 aaKnown RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 RNF122Q9H9V4 155 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 MEPEQ9NQ76 525 aaPredicted RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 LHX6Q9UPM6 363 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 VDAC3Q9Y277 283 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 EXOSC1Q9Y3B2 195 aaKnown RBP8.52□□□□□ -1.04
C11orf54-201ENST00000331239 CMAHPQ9Y471 501 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 CDH10Q9Y6N8 788 aa8.52□□□□□ -1.04
C11orf54-201ENST00000331239 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 LIPT2A6NK58 231 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 TRAPPC6AO75865 159 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 ZNF708P17019 499 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 AZGP1P25311 298 aaKnown RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 MTNR1AP48039 350 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 GPR85P60893 370 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 CRYZQ08257 329 aaKnown RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 HNRNPA0Q13151 305 aaKnown RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 POU4F3Q15319 338 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 ZNF79Q15937 498 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 CCDC92Q53HC0 331 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 EMC4Q5J8M3 183 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 AGAP6Q5VW22 663 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 C22orf42Q6IC83 251 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 FAM180AQ6UWF9 173 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 UFD1Q92890 307 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 FAM46AQ96IP4 442 aaKnown RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 KCTD7Q96MP8 289 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 SNX18Q96RF0 628 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 PTDSS2Q9BVG9 487 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 SRRQ9GZT4 340 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 TPK1Q9H3S4 243 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 NANSQ9NR45 359 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 ZMAT5Q9UDW3 170 aaKnown RBP8.52□□□□□ -1.05
C11orf54-201ENST00000331239 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 GPR52Q9Y2T5 361 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 ZNF175Q9Y473 711 aa8.52□□□□□ -1.05
C11orf54-201ENST00000331239 A0A1W2PNV4 684 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 EFNA2O43921 213 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 PDGFAP04085 211 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 HMGN1P05114 100 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 FUT1P19526 365 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 TGM4P49221 684 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 INPP5JQ15735 1006 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 PLEKHN1Q494U1 663 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ARMC4Q5T2S8 1044 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 OR2G6Q5TZ20 316 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 EEF1A1P5Q5VTE0 462 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ARHGAP11AQ6P4F7 1023 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 H1FNTQ75WM6 255 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 IL17RDQ8NFM7 739 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ZPLD1Q8TCW7 415 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 TMEM203Q969S6 136 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 CPNE4Q96A23 557 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ADGRG7Q96K78 797 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 HES7Q9BYE0 225 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 PRDM14Q9GZV8 571 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ISYNA1Q9NPH2 558 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 NPAP1Q9NZP6 1156 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 HRH3Q9Y5N1 445 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ACACBO00763 2458 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 EPG5Q9HCE0 2579 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 G3V3Y1 287 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 ARPC3O15145 178 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 NDUFB2O95178 105 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 IGHMP01871 453 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 IL7P13232 177 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 BMP7P18075 431 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 POU3F2P20265 443 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-201ENST00000331239 SLC6A6P31641 620 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 UQCRC1P31930 480 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 MAGEA5P43359 124 aa8.51□□□□□ -1.05
C11orf54-201ENST00000331239 LHX2P50458 406 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms