RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TMEM221A6NGB7 291 aa15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC31A2O15432 143 aa15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 RGS11O94810 467 aa15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 ELAVL4P26378 380 aaKnown RBP15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC16A14Q7RTX9 510 aa15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 CNEP1R1Q8N9A8 125 aa15.64■□□□□ 0.09
SMCHD1-201ENST00000320876 TUBGCP6Q96RT7 1819 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 KIR2DS5A0A0G2JLQ3 304 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 A0A0G2JNG1 304 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 KIR2DS3K7RE56 304 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 CHEK1O14757 476 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 PRLHRP49683 370 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 KIR2DS5Q14953 304 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 DPY19L2P2Q6ZN68 376 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF318Q5VUA4 2279 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 TDRD15B5MCY1 1934 aaKnown RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 HEPACAM2A8MVW5 462 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 CHRNEQ04844 493 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF252P-AS1Q0IIN9 211 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF761Q86XN6 746 aaPredicted RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 OR6K3Q8NGY3 331 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 MYO16Q9Y6X6 1858 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 GALR3O60755 368 aaPredicted RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 CLDN12P56749 244 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 RPL3LQ92901 407 aaKnown RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 LGALS8O00214 317 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 UBE2G1P62253 170 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC7A9P82251 487 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 OR8G2PQ6IF36 304 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 WWTR1Q9GZV5 400 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 FOCADQ5VW36 1801 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 TRBV11-1A0A0K0K1C0 115 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 PAPLNO95428 1278 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 F13BP05160 661 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 AOAHP28039 575 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 RAB1AP62820 205 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 AP1G1O43747 822 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 HNRNPA2B1P22626 353 aaKnown RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 DCLRE1CQ96SD1 692 aaKnown RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 MN1Q10571 1320 aaPredicted RBP15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 OR2A25A4D2G3 310 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 MBP02144 154 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 ACKR3P25106 362 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 PAX6P26367 422 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 CGB2Q6NT52 195 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 A4GALTQ9NPC4 353 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 SLCO3A1Q9UIG8 710 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 AK3Q9UIJ7 227 aa15.63■□□□□ 0.09
SMCHD1-201ENST00000320876 NPY4RP50391 375 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF595Q8IYB9 648 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ASB11Q8WXH4 323 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 TUBB1Q9H4B7 451 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ERVMER34-1Q9H9K5 563 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 CSAG2Q9Y5P2 127 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 NPFFR2Q9Y5X5 522 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SCN1AP35498 2009 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ENSAO43768 121 aaKnown RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 OR8G3PP0DMU2 310 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SPP1P10451 314 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC35A1P78382 337 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF542PQ5EBM4 170 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 CT45A10P0DMU9 189 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 GRB2P62993 217 aaKnown RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 RNF212Q495C1 297 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SAT2Q96F10 170 aaPredicted RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 GSX2Q9BZM3 304 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 CLCF1Q9UBD9 225 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 PRAMEF26H0Y7S4 382 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 TIMM8AO60220 97 aaPredicted RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 GDF1P27539 372 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 KDM4DQ6B0I6 523 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 PCNPQ8WW12 178 aaKnown RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC39A13Q96H72 371 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SCPEP1Q9HB40 452 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 C7orf72A4D263 438 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ALKBH1Q13686 389 aaKnown RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 VAMP3Q15836 100 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 OPN5Q6U736 354 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 Q6ZRG5 221 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ST8SIA4Q92187 359 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 TSLPQ969D9 159 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 DOCK2Q92608 1830 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 RAF1P04049 648 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 CCR9P51686 369 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 C1orf61Q13536 156 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF789Q5FWF6 425 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 C19orf35Q6ZS72 473 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC46A3Q7Z3Q1 461 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 CLEC3BP05452 202 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 TACR1P25103 407 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ZNF574Q6ZN55 896 aaPredicted RBP15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 ESPNLQ6ZVH7 1005 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC35D2Q76EJ3 337 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 OR4C5Q8NGB2 326 aa15.62■□□□□ 0.09
SMCHD1-201ENST00000320876 SPINT2O43291 252 aa15.61■□□□□ 0.09
SMCHD1-201ENST00000320876 MRPL33O75394 65 aaKnown RBP15.61■□□□□ 0.09
SMCHD1-201ENST00000320876 SLC35D3Q5M8T2 416 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms