RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 Q96MT0 163 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ZFP3Q96NJ6 502 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 OR2M2Q96R28 347 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 IL4I1Q96RQ9 567 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 NMNAT2Q9BZQ4 307 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 VSX1Q9NZR4 365 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 SLC22A23A1A5C7 686 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 OR6C68A6NDL8 312 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 M0R129 80 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 IGHG1P01857 330 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 CRHP06850 196 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 PGA4P0DJD7 388 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 PGA3P0DJD8 388 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 NR2C1P13056 603 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 AGTR1P30556 359 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 RUNX1T1Q06455 604 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 AADACL4Q5VUY2 407 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 B3GNT6Q6ZMB0 384 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 CXXC5Q7LFL8 322 aaKnown RBP12.07□□□□□ -0.48
PRPF18-201ENST00000320054 AAED1Q7RTV5 226 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 TUSC5Q8IXB3 177 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 C9orf106Q8NAJ2 232 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 NOXO1Q8NFA2 376 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 APH1BQ8WW43 257 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
PRPF18-201ENST00000320054 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 LRR1Q96L50 414 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 NMNAT3Q96T66 252 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 EMC6Q9BV81 110 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 RASSF1Q9NS23 344 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 CLN6Q9NWW5 311 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 GPR52Q9Y2T5 361 aa12.07□□□□□ -0.48
PRPF18-201ENST00000320054 NOSIPQ9Y314 301 aaKnown RBP12.07□□□□□ -0.48
PRPF18-201ENST00000320054 SH3D21A4FU49 640 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 SLC43A1O75387 559 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 MRPL33O75394 65 aaKnown RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 WBP4O75554 376 aaKnown RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CEACAM8P31997 349 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 NTF4P34130 210 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF133P52736 654 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CASP6P55212 293 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CLRN1P58418 232 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CXCR4P61073 352 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CAMK2DQ13557 499 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 SEM1Q6ZVN7 128 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 FAM214BQ7L5A3 538 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 GID4Q8IVV7 300 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 C20orf196Q8IYI0 205 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 OR2T4Q8NH00 348 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 RFKQ969G6 155 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 TMEM54Q969K7 222 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 NMD3Q96D46 503 aaKnown RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 RBP7Q96R05 134 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 LINC00470Q9BZP3 86 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 UBAP1Q9NZ09 502 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 FKBP7Q9Y680 259 aa12.06□□□□□ -0.48
PRPF18-201ENST00000320054 SPENQ96T58 3664 aaKnown RBP12.06□□□□□ -0.48
PRPF18-201ENST00000320054 FAM183AA6NL82 134 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SNTNA6NMZ2 147 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 PRODHO43272 600 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 IL2RAP01589 272 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 GLI4P10075 376 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SLC2A5P22732 501 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 CRABP1P29762 137 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 CSNK1A1P48729 337 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SELENOPP49908 381 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 CSNK2BP67870 215 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 TMED1Q13445 227 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SLC35D3Q5M8T2 416 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 C6orf141Q5SZD1 244 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 RIPPLY2Q5TAB7 128 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 LAIR2Q6ISS4 152 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 ZBTB46Q86UZ6 589 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SYT14Q8NB59 555 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 CNIH3Q8TBE1 160 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF582Q96NG8 517 aaPredicted RBP12.05□□□□□ -0.48
PRPF18-201ENST00000320054 BBC3Q96PG8 261 aaPredicted RBP12.05□□□□□ -0.48
PRPF18-201ENST00000320054 HCAR1Q9BXC0 346 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SYT4Q9H2B2 425 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 SLCO5A1Q9H2Y9 848 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms