RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ABCD3P28288 659 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 RAB11BQ15907 218 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ENTHD1Q8IYW4 607 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR11G2Q8NGC1 345 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC5A7Q9GZV3 580 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 DCSTAMPQ9H295 470 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ANKRA2Q9H9E1 313 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 RLIMQ9NVW2 624 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NUP214P35658 2090 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM25EA8MYX2 175 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 M0R1B8 84 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PPP1R3DO95685 299 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TFAP2AP05549 437 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PRKACBP22694 351 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 IL18Q14116 193 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 GPR176Q14439 515 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 OR8B8Q15620 311 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 GLYR1Q49A26 553 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 H1FNTQ75WM6 255 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NKAIN4Q8IVV8 208 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 ZFAND2BQ8WV99 257 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 TCEAL3Q969E4 200 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 PPP1R14BQ96C90 147 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 INTS12Q96CB8 462 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 NRTNQ99748 197 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 RNF32Q9H0A6 362 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 MED11Q9P086 117 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 KCNE3Q9Y6H6 103 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 A3GALT2U3KPV4 340 aa7.79□□□□□ -1.16
PDLIM5-201ENST00000317968 KIAA1549LQ6ZVL6 1849 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 GNAO1P09471 354 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ERVK-16P61578 105 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 COL28A1Q2UY09 1125 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR7E24Q6IFN5 339 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 PYHIN1Q6K0P9 492 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 PLBD1Q6P4A8 553 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR5T2Q8NGG2 359 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 GGHQ92820 318 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ICAM5Q9UMF0 924 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 STUB1Q9UNE7 303 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF175Q9Y473 711 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TRABD2BA6NFA1 517 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TRAPPC2LH3BP13 241 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 IFNGR1P15260 489 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF16P17020 682 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ZFP36L1Q07352 338 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CHRFAM7AQ494W8 412 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ATAD3CQ5T2N8 411 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 PLCXD3Q63HM9 321 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 AP1ARQ63HQ0 302 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 HMGN2P46Q86SG4 172 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 YRDCQ86U90 279 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 MAML2Q8IZL2 1156 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ABCA7Q8IZY2 2146 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM255BQ8WV15 326 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 MUL1Q969V5 352 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 C12orf43Q96C57 262 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ISOC1Q96CN7 298 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 IGHV3-20A0A0C4DH32 117 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CCDC182A6NF36 153 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 F5H5K5 113 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CT45A8P0DMV1 189 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CT45A9P0DMV2 189 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 RPS5P46782 204 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 GABRA2P47869 451 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 RNF144AP50876 292 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 HOXC5Q00444 222 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TSTQ16762 297 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CT45A2Q5DJT8 189 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM244Q5VVB8 128 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM131AQ6UXB0 335 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 BEND4Q6ZU67 534 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 DTX3Q8N9I9 347 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF721Q8TF20 911 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 C4orf51C9J302 202 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ICOSLGO75144 302 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 MGAT2Q10469 447 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 RNLSQ5VYX0 342 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 WDR88Q6ZMY6 472 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 MARCH3Q86UD3 253 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 RBM45Q8IUH3 476 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 SFTPA2Q8IWL1 248 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR2V1Q8NHB1 315 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 C3orf49Q96BT1 292 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 SNX18Q96RF0 628 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 LRFN3Q9BTN0 628 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 ALG12Q9BV10 488 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 PAPOLGQ9BWT3 736 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 CPNE5Q9HCH3 593 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OCIAD1Q9NX40 245 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TSPAN9O75954 239 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 DHFRP00374 187 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 RPL19P84098 196 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms