RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CT45A9P0DMV2 189 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 SEC13P55735 322 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 SSBP1Q04837 148 aaKnown RBP17.35■□□□□ 0.37
RTN4-201ENST00000317610 HSPB2Q16082 182 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 CT45A2Q5DJT8 189 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 NKAIN2Q5VXU1 208 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 ARHGEF39Q8N4T4 335 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 ESX1Q8N693 406 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 OR52H1Q8NGJ2 320 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 OR10AC1Q8NH08 325 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 COMMD4Q9H0A8 199 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 C1orf198Q9H425 327 aa17.35■□□□□ 0.37
RTN4-201ENST00000317610 H0YC42 278 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 K7EQS6 105 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 DCTN6O00399 190 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 TOR1AO14656 332 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 RASGRP1O95267 797 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 MPGP29372 298 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 EFNB2P52799 333 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 CTXN1P60606 82 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 ALG10Q5BKT4 473 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 ATG4DQ86TL0 474 aaPredicted RBP17.34■□□□□ 0.37
RTN4-201ENST00000317610 BIVMQ86UB2 503 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 BCORP1Q8N888 145 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 TMEM106AQ96A25 262 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 B3GNT4Q9C0J1 378 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 MS4A7Q9GZW8 240 aaPredicted RBP17.34■□□□□ 0.37
RTN4-201ENST00000317610 WDR76Q9H967 626 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 STARD5Q9NSY2 213 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 ATG2BQ96BY7 2078 aa17.34■□□□□ 0.37
RTN4-201ENST00000317610 ARHGEF17Q96PE2 2063 aaPredicted RBP17.34■□□□□ 0.37
RTN4-201ENST00000317610 FAM221BA6H8Z2 402 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 ELOA3DA6NLF2 546 aaPredicted RBP17.33■□□□□ 0.37
RTN4-201ENST00000317610 LGALS8O00214 317 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 HPP00738 406 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 PNMTP11086 282 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 ALOX5APP20292 161 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.33■□□□□ 0.37
RTN4-201ENST00000317610 ELOA3BQ3SY89 546 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 EMC4Q5J8M3 183 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 ZNF676Q8N7Q3 588 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 ELOA3Q8NG57 546 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 OR51S1Q8NGJ8 323 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 OR9A4Q8NGU2 314 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 BMFQ96LC9 184 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 MOGAT1Q96PD6 335 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 SLC17A5Q9NRA2 495 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 MPDZO75970 2070 aa17.33■□□□□ 0.37
RTN4-201ENST00000317610 D6RAR5 112 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 ATP6V1G2-DDX39BF2Z307 99 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 TNFRSF10CO14798 259 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 PRAMEF2O60811 474 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 ASAH2BP0C7U1 165 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 NAT1P18440 290 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 MAZP56270 477 aaKnown RBP17.33■□□□□ 0.36
RTN4-201ENST00000317610 UBE2MP61081 183 aaKnown RBP17.33■□□□□ 0.36
RTN4-201ENST00000317610 IGLV3-21P80748 117 aaPredicted RBP17.33■□□□□ 0.36
RTN4-201ENST00000317610 GUCA2AQ02747 115 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 RASGEF1BQ0VAM2 473 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 ITPRIPL2Q3MIP1 535 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 KLHL26Q53HC5 615 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 WBP2NLQ6ICG8 309 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 YAF2Q8IY57 180 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 PRSS35Q8N3Z0 413 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 STPG2Q8N412 459 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 CLEC1AQ8NC01 280 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 OR51D1Q8NGF3 324 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 OR51A4Q8NGJ6 313 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 MMP25Q9NPA2 562 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 IKZF2Q9UKS7 526 aa17.33■□□□□ 0.36
RTN4-201ENST00000317610 ARPC4-TTLL3A0A0A6YYG9 625 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TCRBV16S1A1N1A0A5B0 115 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 RFPL4AA6NLU0 287 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 RFPL4AL1F8VTS6 287 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 HCRTR1O43613 425 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 AKR7A3O95154 331 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 ITGB2P05107 769 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 GTF2F2P13984 249 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TNFRSF4P43489 277 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 PGDP52209 483 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TMEM196Q5HYL7 178 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 ZNF454Q8N9F8 522 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TNFAIP8L1Q8WVP5 186 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 THRSPQ92748 146 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 C4orf45Q96LM5 186 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 SRA1Q9HD15 236 aaKnown RBP17.32■□□□□ 0.36
RTN4-201ENST00000317610 TVP23AA6NH52 213 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TTLL8A6PVC2 850 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 H3BUI4 141 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 SDC3O75056 442 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 WDPCPO95876 746 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 KIR3DL2P43630 455 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 GPR3P46089 330 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 POU3F4P49335 361 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 TOMM20Q15388 145 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 FNDC7Q5VTL7 733 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 YOD1Q5VVQ6 348 aaPredicted RBP17.32■□□□□ 0.36
RTN4-201ENST00000317610 FDX2Q6P4F2 183 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms