RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FOXB1Q99853 325 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ULBP2Q9BZM5 246 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 POU2F3Q9UKI9 436 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 HIF3AQ9Y2N7 669 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 ATP23Q9Y6H3 246 aa12.66□□□□□ -0.38
PPP1CA-201ENST00000312989 IGHV2OR16-5A0A0B4J2B6 119 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 SERPINA1P01009 418 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 F13BP05160 661 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 MAKP20794 623 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 APOBEC3AP31941 199 aaPredicted RBP12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 CSNK1A1P48729 337 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 NANOGNBQ7Z5D8 188 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 OR10H5Q8NGA6 315 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 OR6N1Q8NGY5 312 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 TRMT61AQ96FX7 289 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 SLC25A44Q96H78 314 aaPredicted RBP12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 CA10Q9NS85 328 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 RHCGQ9UBD6 479 aa12.65□□□□□ -0.38
PPP1CA-201ENST00000312989 A0A087WUU8 490 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 IGKV1D-43A0A0B4J1Z2 117 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 RNF13O43567 381 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 SEMG1P04279 462 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ARR3P36575 388 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 GNGT1P63211 74 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF813Q6ZN06 617 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 MEX3DQ86XN8 651 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 SKA3Q8IX90 412 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 GEMIN6Q8WXD5 167 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 C7orf34Q96L11 122 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF347Q96SE7 839 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 MOV10Q9HCE1 1003 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 TMEM38BQ9NVV0 291 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
PPP1CA-201ENST00000312989 IGHV4-30-2A0A087WSY4 118 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 TMEM129A0AVI4 362 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 RNF223E7ERA6 249 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 DHHO43323 396 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 TRMUO75648 421 aaKnown RBP12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 OR6A2O95222 327 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF682O95780 498 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 IGHMP01871 453 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 CRYAAP02489 173 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 IFNW1P05000 195 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 PATE4P0C8F1 98 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 UMPSP11172 480 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF35P13682 527 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 LAPTM4AQ15012 233 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 EFNB3Q15768 340 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 KRTAP21-3Q3LHN1 58 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 IFI44LQ53G44 452 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 NRMQ8IXM6 262 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 FAM156AQ8NDB6 213 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 MAPK1IP1LQ8NDC0 245 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 NOXO1Q8NFA2 376 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 HDAC2Q92769 488 aaKnown RBP12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF566Q969W8 418 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 KCTD14Q9BQ13 255 aaPredicted RBP12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 FUZQ9BT04 418 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF442Q9H7R0 627 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 ARL8BQ9NVJ2 186 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 CD300AQ9UGN4 299 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 EGFL7Q9UHF1 273 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 UGT2A1Q9Y4X1 527 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
PPP1CA-201ENST00000312989 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 CDC42EP2O14613 210 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 PDE5AO76074 875 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 LY6HO94772 140 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 THBS4P35443 961 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 PRKCDQ05655 676 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 NPRL3Q12980 569 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 TBPL2Q6SJ96 375 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 PIWIL3Q7Z3Z3 882 aaKnown RBP12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 RNF148Q8N7C7 305 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 NANOS1Q8WY41 292 aaKnown RBP12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms