RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 BCL10O95999 233 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SCG5P05408 212 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 QDPRP09417 244 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 CD53P19397 219 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 PCYT1AP49585 367 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 BEX5Q5H9J7 111 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 LIPHQ8WWY8 451 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 NSMAFQ92636 917 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 TMEM54Q969K7 222 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SLCO4A1Q96BD0 722 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 RASD2Q96D21 266 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ASB9Q96DX5 294 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ALPK1Q96QP1 1244 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 TMEM204Q9BSN7 226 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ULBP2Q9BZM5 246 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 LINC00470Q9BZP3 86 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 INIPQ9NRY2 104 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 PRDM4Q9UKN5 801 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 PRPF19Q9UMS4 504 aaKnown RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 MOKQ9UQ07 419 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SIGLEC7Q9Y286 467 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 MAGED1Q9Y5V3 778 aaPredicted RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 IGHV1-18A0A0C4DH31 117 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 ATP6V1G2-DDX39BF2Z307 99 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 NDUFS7O75251 213 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 ATE1O95260 518 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 SOD3P08294 240 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 PEX19P40855 299 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CSNK1A1P48729 337 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 NPRL3Q12980 569 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 ANKK1Q8NFD2 765 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 OR6X1Q8NH79 312 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 MCHR2Q969V1 340 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 UTP4Q969X6 686 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 MUCL1Q96DR8 90 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 MRPL13Q9BYD1 178 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 POLR2J2Q9GZM3 115 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 POLR2J3Q9H1A7 115 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 GLTPQ9NZD2 209 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 LYVE1Q9Y5Y7 322 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 DSCAMO60469 2012 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 HEATR1Q9H583 2144 aaKnown RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 PTP4A3O75365 173 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CCL2P13500 99 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 PPP3CBP16298 524 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CD40P25942 277 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CALCRP30988 508 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CAPZA2P47755 286 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 KEAP1Q14145 624 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 PGGHGQ32M88 737 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 TMPRSS11FQ6ZWK6 438 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 MDP1Q86V88 176 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 CYP4Z1Q86W10 505 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 SKA3Q8IX90 412 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 OR4C15Q8NGM1 316 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF566Q969W8 418 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 SLC25A44Q96H78 314 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-201ENST00000311943 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 EGLN3Q9H6Z9 239 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 LAMP3Q9UQV4 416 aa10.5□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF99A8MXY4 864 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-201ENST00000311943 E7EQL1 145 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 RPL36A-HNRNPH2H7BZ11 118 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 OR10H3O60404 316 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 DNAJC8O75937 253 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-201ENST00000311943 GASTP01350 101 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 ACVR1BP36896 505 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 MAGEA2P43356 314 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 IDH3GP51553 393 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-201ENST00000311943 ART1P52961 327 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 MESTQ5EB52 335 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 PGBD2Q6P3X8 592 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF813Q6ZN06 617 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 RRM2BQ7LG56 351 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 LRRC18Q8N456 261 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 NMD3Q96D46 503 aaKnown RBP10.49□□□□□ -0.73
SCFD1-201ENST00000311943 FOXB1Q99853 325 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 TEP1Q99973 2627 aaKnown RBP10.49□□□□□ -0.73
SCFD1-201ENST00000311943 CHID1Q9BWS9 393 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 PLA2G12AQ9BZM1 189 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
SCFD1-201ENST00000311943 TEX13CA0A0J9YWL9 993 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 DCTN6O00399 190 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 MPZL1O95297 269 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 PPP1R3DO95685 299 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ACADSP16219 412 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 PRKACGP22612 351 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RPL4P36578 427 aaKnown RBP10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CDKN1AP38936 164 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 HIST3H3Q16695 136 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ZBED5Q49AG3 693 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 UGT2A3Q6UWM9 527 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 PTCHD4Q6ZW05 846 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 FAM122BQ7Z309 247 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 KRTAP1-3Q8IUG1 177 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms