RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 LRIF1Q5T3J3 769 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 GKAP1Q5VSY0 366 aaPredicted RBP10.46□□□□□ -0.73
TPT1-201ENST00000309246 UGT2A3Q6UWM9 527 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 NHLRC1Q6VVB1 395 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 ZNF627Q7L945 461 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 KRT73Q86Y46 540 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 SCAIQ8N9R8 606 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 OR6S1Q8NH40 331 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 RDH5Q92781 318 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 YIPF5Q969M3 257 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 LRR1Q96L50 414 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 SPATA5L1Q9BVQ7 753 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 TMEM27Q9HBJ8 222 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
TPT1-201ENST00000309246 NKIRAS1Q9NYS0 192 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.73
TPT1-201ENST00000309246 C11orf98E9PRG8 122 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 PLPP3O14495 311 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 TPST2O60704 377 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 UBL3O95164 117 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 PATE4P0C8F1 98 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 NAT2P11245 290 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 ACHEP22303 614 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 AHCYP23526 432 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 CSNK1A1P48729 337 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 CDH12P55289 794 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 BIDP55957 195 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 RPS23P62266 143 aaKnown RBP10.45□□□□□ -0.74
TPT1-201ENST00000309246 SCARB2Q14108 478 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 ALKBH6Q3KRA9 238 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 EPGNQ6UW88 154 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 FUNDC1Q8IVP5 155 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 FGFBP3Q8TAT2 258 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 RACGAP1Q9H0H5 632 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 IKZF5Q9H5V7 419 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 ZNF275Q9NSD4 429 aaPredicted RBP10.45□□□□□ -0.74
TPT1-201ENST00000309246 HIF1ANQ9NWT6 349 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 TREM2Q9NZC2 230 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 VAPAQ9P0L0 249 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 DUSP13Q9UII6 198 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 SLC13A4Q9UKG4 626 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 SVEP1Q4LDE5 3571 aa10.45□□□□□ -0.74
TPT1-201ENST00000309246 A0A1W2PPW3 197 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 PRORSD1PA6NEY8 169 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 PPIHO43447 177 aaKnown RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 RGS9O75916 674 aaPredicted RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 MSMBP08118 114 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 ADORA3P0DMS8 318 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 PPIBP23284 216 aaKnown RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 LSP1P33241 339 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 GYS2P54840 703 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 REP15Q6BDI9 236 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 SHQ1Q6PI26 577 aaKnown RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 WDR88Q6ZMY6 472 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 VASH1Q7L8A9 365 aaPredicted RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 PXKQ7Z7A4 578 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 RANBP3LQ86VV4 465 aaPredicted RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 SNX32Q86XE0 403 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 ARMC8Q8IUR7 673 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 ZNF584Q8IVC4 421 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 SKA3Q8IX90 412 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 SEMA6DQ8NFY4 1073 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 OR5J2Q8NH18 312 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 SPDL1Q96EA4 605 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 TMEM43Q9BTV4 400 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 DENND2DQ9H6A0 471 aaPredicted RBP10.44□□□□□ -0.74
TPT1-201ENST00000309246 TCF7L2Q9NQB0 619 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 CCDC167Q9P0B6 97 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 SLC7A8Q9UHI5 535 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
TPT1-201ENST00000309246 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 TRBV5-3A0A0A0MS03 114 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 M0R3H8 397 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 RP2O75695 350 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 CLPTM1O96005 669 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 MT-ATP6P00846 226 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 TFP02787 698 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 OPN1SWP03999 348 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 FAM157BP0CG42 384 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 GAAP10253 952 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 SLC6A2P23975 617 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 CFPP27918 469 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 MAGEB1P43366 347 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 MRPL19P49406 292 aaKnown RBP10.43□□□□□ -0.74
TPT1-201ENST00000309246 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
TPT1-201ENST00000309246 SLC18A1P54219 525 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 MELKQ14680 651 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 NKPD1Q17RQ9 610 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 RGS7BPQ6MZT1 257 aaPredicted RBP10.43□□□□□ -0.74
TPT1-201ENST00000309246 DEF8Q6ZN54 512 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 SLC35D2Q76EJ3 337 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 SLC22A24Q8N4F4 322 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 SMYD1Q8NB12 490 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 OR51F2Q8NH61 342 aa10.43□□□□□ -0.74
TPT1-201ENST00000309246 TMEM54Q969K7 222 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms