RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TRBV23-1A0A0A0MS06 115 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 A0A1W2PPL8 197 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SHISA3A0PJX4 238 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SAGE2PA6NJ88 616 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 TP53I11O14683 189 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 TBX1O43435 398 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SCG5P05408 212 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 RHCEP18577 417 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 POU3F2P20265 443 aaPredicted RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 SOX18P35713 384 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SLC6A9P48067 706 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 EIF2B2P49770 351 aaKnown RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 ATP12AP54707 1039 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SNU13P55769 128 aaKnown RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 TLE3Q04726 772 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 CLN3Q13286 438 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 PON3Q15166 354 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 RNFT1Q5M7Z0 435 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 CD300LDQ6UXZ3 194 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 NDUFAF7Q7L592 441 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 PRSS42Q7Z5A4 293 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 NANOGNBQ7Z5D8 188 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SLC34A3Q8N130 599 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 BBS1Q8NFJ9 593 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 ZNF417Q8TAU3 575 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 THEM6Q8WUY1 208 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 HSD17B8Q92506 261 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 NXPE2Q96DL1 559 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 SPACA9Q96E40 222 aaPredicted RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 CCDC120Q96HB5 630 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 ZNF587Q96SQ5 575 aaPredicted RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 UCK2Q9BZX2 261 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 TRIM45Q9H8W5 580 aaPredicted RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 CNOT2Q9NZN8 540 aaKnown RBP4.46□□□□□ -1.7
CAST-201ENST00000309190 GRHPRQ9UBQ7 328 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 LHX6Q9UPM6 363 aa4.46□□□□□ -1.7
CAST-201ENST00000309190 ZFHX3Q15911 3703 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 F8P00451 2351 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 RPS10-NUDT3A0A1W2PQS6 291 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 FAM90A27PA6NNH2 459 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 MKRN2OSH3BPM6 223 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SUSD5O60279 629 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PLOD3O60568 738 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SC5DO75845 299 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SLITRK5O94991 958 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 CCNB2O95067 398 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ARAFP10398 606 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 NAGAP17050 411 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 S1PR1P21453 382 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 HTR2AP28223 471 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 MEOX1P50221 254 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 CLDN15P56746 228 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 CSNK2BP67870 215 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 MGAT2Q10469 447 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 EFR3AQ14156 821 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PCOLCEQ15113 449 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PLEKHN1Q494U1 663 aaPredicted RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 CCDC58Q4VC31 144 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 RNASE12Q5GAN4 147 aaKnown RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 ZNF766Q5HY98 468 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 REC114Q7Z4M0 266 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ZNF555Q8NEP9 628 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 TMCO6Q96DC7 493 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 KATNB1Q9BVA0 655 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SYT4Q9H2B2 425 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 NEK6Q9HC98 313 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PLSCR3Q9NRY6 295 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ACSS1Q9NUB1 689 aaPredicted RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 ACER3Q9NUN7 267 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ABI3Q9P2A4 366 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 EIF3KQ9UBQ5 218 aaKnown RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 CLDN16Q9Y5I7 305 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 IGHV1-45A0A0A0MS14 117 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 A0A1B0GVC2 190 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 AHSA1O95433 338 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SMIM10L1P0DMW3 83 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 FGF5P12034 268 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 HLA-DMAP28067 261 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PCGF2P35227 344 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PSMB10P40306 273 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PSMD4P55036 377 aaKnown RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 TPTEP56180 551 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SNRPGP62308 76 aaKnown RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 RPP38P78345 283 aaKnown RBP4.45□□□□□ -1.7
CAST-201ENST00000309190 CARTPTQ16568 116 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 MICAQ29983 383 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SAXO2Q658L1 398 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 SIGIRRQ6IA17 410 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 PAQR6Q6TCH4 344 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 UNQ6494/PRO21346Q6UXR6 183 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 THSD4Q6ZMP0 1018 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 IKBIPQ70UQ0 350 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ZER1Q7Z7L7 766 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 GRAMD2AQ8IUY3 354 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 OR2L13Q8N349 312 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ZNF615Q8N8J6 731 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ZNF527Q8NB42 609 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 ZNF540Q8NDQ6 660 aa4.45□□□□□ -1.7
CAST-201ENST00000309190 OR14A16Q8NHC5 309 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms