RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 CCDC36Q8IYA8 594 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 SPICQ8N5J4 248 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 MS4A6EQ96DS6 147 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 C10orf90Q96M02 699 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 CHRDQ9H2X0 955 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 NKX2-4Q9H2Z4 354 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 FOXJ3Q9UPW0 622 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 EFNB2P52799 333 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 SHC2P98077 582 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 ACSM1Q08AH1 577 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 ADAMTSL4Q6UY14 1074 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 OR2L3Q8NG85 312 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 NUBPLQ8TB37 319 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 ATG5Q9H1Y0 275 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 NDRG3Q9UGV2 375 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 SPAG17Q6Q759 2223 aa16.37■□□□□ 0.21
RETREG1-201ENST00000306320 OR5H14A6NHG9 310 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 DCNP07585 359 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ZNF28P17035 718 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 TYRP1P17643 537 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 PPP1CAP62136 330 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 C9orf152Q5JTZ5 239 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 POMZP3Q6PJE2 187 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 MCATQ8IVS2 390 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 RAB42Q8N4Z0 105 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ZNF676Q8N7Q3 588 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ANKRD20A5PA0PJZ0 165 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ZFPL1O95159 310 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 KLF8O95600 359 aaPredicted RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 SNTB1Q13884 538 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 PON3Q15166 354 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 AVPI1Q5T686 147 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 OR5T2Q8NGG2 359 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 OR1J2Q8NGS2 313 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ZNRF4Q8WWF5 429 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 OR1E3Q8WZA6 343 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 TCEAL3Q969E4 200 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 CNN2Q99439 309 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 BCL2L14Q9BZR8 327 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 MRPS2Q9Y399 296 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ELOA3DA6NLF2 546 aaPredicted RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 CTNSO60931 367 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 CTSBP07858 339 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ATP1B3P54709 279 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ELOA3BQ3SY89 546 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ELOA3Q8NG57 546 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 TSEN15Q8WW01 171 aaKnown RBP16.36■□□□□ 0.21
RETREG1-201ENST00000306320 RASD2Q96D21 266 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 Q96M85 177 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 APOOQ9BUR5 198 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 C2orf42Q9NWW7 574 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 ST6GALNAC2Q9UJ37 374 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 SLC35A3Q9Y2D2 325 aa16.36■□□□□ 0.21
RETREG1-201ENST00000306320 TMEM72A0PK05 275 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 NAP1L6A6NFF2 107 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 EMC8O43402 210 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 HLA-AP01891 365 aaKnown RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 HOXB2P14652 356 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 AVPR2P30518 371 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 TRAM1Q15629 374 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 PWWP2BQ6NUJ5 590 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 PXKQ7Z7A4 578 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 OR1M1Q8NGA1 313 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 OR10AC1Q8NH08 325 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 TCEAL2Q9H3H9 227 aaPredicted RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 CMC2Q9NRP2 79 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 MED17Q9NVC6 651 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 COA4Q9NYJ1 87 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 BHLHE40O14503 412 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 ACAA1P09110 424 aaPredicted RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 OR10K2Q6IF99 312 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 ABHD17CQ6PCB6 329 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 ZNF765Q7L2R6 523 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 TMEM200AQ86VY9 491 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 METTL27Q8N6F8 245 aaPredicted RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 INO80EQ8NBZ0 244 aaPredicted RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 C14orf79Q96F83 325 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 WDR77Q9BQA1 342 aaPredicted RBP16.35■□□□□ 0.21
RETREG1-201ENST00000306320 HDAC8Q9BY41 377 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 RNF215Q9Y6U7 377 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 CABIN1Q9Y6J0 2220 aa16.35■□□□□ 0.21
RETREG1-201ENST00000306320 TMEM218A2RU14 115 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 TRAPPC13A5PLN9 417 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 CACNB4O00305 520 aaPredicted RBP16.34■□□□□ 0.21
RETREG1-201ENST00000306320 ITGA10O75578 1167 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 IFNGP01579 166 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 HTR2AP28223 471 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 CCR4P51679 360 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 EIF2B1Q14232 305 aaKnown RBP16.34■□□□□ 0.21
RETREG1-201ENST00000306320 DUSP5Q16690 384 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 TRMT12Q53H54 448 aaKnown RBP16.34■□□□□ 0.21
RETREG1-201ENST00000306320 GJD3Q8N144 294 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 OR56A1Q8NGH5 318 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 ZPLD1Q8TCW7 415 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 ISOC2Q96AB3 205 aa16.34■□□□□ 0.21
RETREG1-201ENST00000306320 ZC3H10Q96K80 434 aaKnown RBP16.34■□□□□ 0.21
RETREG1-201ENST00000306320 SLC19A3Q9BZV2 496 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms