RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CCDC74AQ96AQ1 378 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 OMA1Q96E52 524 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TNFRSF13CQ96RJ3 184 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 TSPAN10Q9H1Z9 355 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 OR10A4Q9H209 315 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 FGF22Q9HCT0 170 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SLC17A5Q9NRA2 495 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 ZNF222Q9UK12 451 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 GMEB2Q9UKD1 530 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 AK6Q9Y3D8 172 aaKnown RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 ARHGEF17Q96PE2 2063 aaPredicted RBP4.93□□□□□ -1.62
VPS50-202ENST00000305866 KIR2DS5A0A0G2JLQ3 304 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 A0A0G2JNG1 304 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 KIR2DS3K7RE56 304 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 GYPBP06028 91 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ACRP10323 421 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 RPS2P15880 293 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 PTNP21246 168 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ZBTB25P24278 435 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 CDKN2AP42771 156 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 GPR3P46089 330 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 LSSP48449 732 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 KIR2DS5Q14953 304 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SMAD2Q15796 467 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 STK11Q15831 433 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 PCK2Q16822 640 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ARL9Q6T311 187 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ALKAL2Q6UX46 152 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 DNAAF1Q8NEP3 725 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ZDHHC1Q8WTX9 485 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 C8orf44Q96CB5 159 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 BPIFA2Q96DR5 249 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SGTBQ96EQ0 304 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ELMOD3Q96FG2 381 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 C1orf147Q96MC9 270 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 BBS4Q96RK4 519 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 TRIM2Q9C040 744 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ADAM19Q9H013 955 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 KCNK15Q9H427 330 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 MRPL15Q9P015 296 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 HIF3AQ9Y2N7 669 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ETV7Q9Y603 341 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 COL6A3P12111 3177 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 A0A0G2JN53 185 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 A0A1B0GTH9 108 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 A0A1W2PQD3 144 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 GXYLT2A0PJZ3 443 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 CPED1A4D0V7 1026 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 OR6C76A6NM76 312 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 POM121CA8CG34 1229 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 BLOC1S5-TXNDC5H3BN57 136 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 TOXO94900 526 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SIX6O95475 246 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 MRPL3P09001 348 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 C8orf89P0DMQ9 161 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SPI1P17947 270 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ZNF10P21506 573 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 NUP62P37198 522 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 GPR143P51810 404 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 PITPNAQ00169 270 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SLC3A1Q07837 685 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 GUCA2BQ16661 112 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ITPRIPL2Q3MIP1 535 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 PDSS1Q5T2R2 415 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 PRSS41Q7RTY9 318 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 HMGB4Q8WW32 186 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 OR1E3Q8WZA6 343 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 EDAQ92838 391 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 RRNAD1Q96FB5 475 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 FCRL4Q96PJ5 515 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 CD180Q99467 661 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 TBX5Q99593 518 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 NUDT16L1Q9BRJ7 211 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 NDC1Q9BTX1 674 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 RTN4RQ9BZR6 473 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 C8orf33Q9H7E9 229 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 TINAGQ9UJW2 476 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 B3GALT1Q9Y5Z6 326 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 IGKV3D-11A0A0A0MRZ8 115 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 A0A0J9YY10 115 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ACOD1A6NK06 481 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 H0YIZ8 118 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 PHOX2AO14813 284 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 B3GALT2O43825 422 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 OR2T1O43869 369 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 IGHV2-5P01817 119 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 CTSBP07858 339 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 ACAA1P09110 424 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 NTSR1P30989 418 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 CENPAP49450 140 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 UBE2MP61081 183 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 GUCA2AQ02747 115 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 HABP2Q14520 560 aaPredicted RBP4.92□□□□□ -1.62
VPS50-202ENST00000305866 PNLIPRP3Q17RR3 467 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 SLC6A19Q695T7 634 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 FCRLAQ7L513 359 aa4.92□□□□□ -1.62
VPS50-202ENST00000305866 RRM2BQ7LG56 351 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms