RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 LTBQ06643 244 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 RPL18Q07020 188 aaKnown RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 KLF9Q13886 244 aaPredicted RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 FCN2Q15485 313 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 Q499Y3 187 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 CDC20BQ86Y33 519 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 TIGD4Q8IY51 512 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 CMTM4Q8IZR5 234 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 ZNF511Q8NB15 262 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 HSD17B8Q92506 261 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 ADIPOR1Q96A54 375 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 OR8D2Q9GZM6 311 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 OR51J1Q9H342 316 aa12.87□□□□□ -0.35
RAB40A-201ENST00000304236 CCDC86Q9H6F5 360 aaKnown RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 RANBP3Q9H6Z4 567 aaPredicted RBP12.87□□□□□ -0.35
RAB40A-201ENST00000304236 IGKV3D-11A0A0A0MRZ8 115 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 A0A1W2PQD3 144 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 ANKRD34BA5PLL1 514 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 LMO7DNF2Z398 122 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 SERPINI2O75830 405 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 GIFP27352 417 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 NANOS3P60323 173 aaKnown RBP12.86□□□□□ -0.35
RAB40A-201ENST00000304236 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
RAB40A-201ENST00000304236 EGR3Q06889 387 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 HLA-DQA1Q5Y7H0 255 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
RAB40A-201ENST00000304236 APOOLQ6UXV4 268 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 TTLL10Q6ZVT0 673 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 OR5AK2Q8NH90 309 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 THRSPQ92748 146 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 TCF7L1Q9HCS4 588 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
RAB40A-201ENST00000304236 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ACOD1A6NK06 481 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 A6NL46 340 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 A8MUA0 341 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 FAM171A2A8MVW0 826 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 TO15178 435 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 UPK3AO75631 287 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 DKK1O94907 266 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ALX3O95076 343 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 DDAH2O95865 285 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 RAF1P04049 648 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 CXCR1P25024 350 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 DPP4P27487 766 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 IL12BP29460 328 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 GDNFP39905 211 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ARL4DP49703 201 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 TMPRSS7Q7RTY8 843 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ZNF321PQ8N8H1 164 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 PHF21AQ96BD5 680 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 KTI12Q96EK9 354 aaPredicted RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 S100A16Q96FQ6 103 aaKnown RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 MAP6Q96JE9 813 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 TSPAN32Q96QS1 320 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ADOQ96SZ5 270 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ELF4Q99607 663 aaPredicted RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 GFI1Q99684 422 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 WDR76Q9H967 626 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 SRA1Q9HD15 236 aaKnown RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
RAB40A-201ENST00000304236 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ETV7Q9Y603 341 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 NUP210LQ5VU65 1888 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 TRAV36DV7A0A075B6V5 113 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 TRBV5-5A0A0J9YX44 114 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 IDSB3KWA1 339 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 YKT6O15498 198 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ABHD16AO95870 558 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 OR8G3PP0DMU2 310 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 ANXA3P12429 323 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 MST1P26927 711 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 GRPRP30550 384 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 MNDAP41218 407 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 CENPAP49450 140 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 SCAND1P57086 179 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 HES5Q5TA89 166 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
RAB40A-201ENST00000304236 LRRN1Q6UXK5 716 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms