RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SLCO3A1Q9UIG8 710 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 RP1L1Q8IWN7 2480 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FRS3O43559 492 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 THBS1P07996 1170 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GNB3P16520 340 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ADRA2CP18825 462 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZP3P21754 424 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SNCAP37840 140 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SRYQ05066 204 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 HABP2Q14520 560 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FAM74A1Q5RGS3 127 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 MZB1Q8WU39 189 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 IL1F10Q8WWZ1 152 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FTSJ1Q9UET6 329 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 TIMP2P16035 220 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CLDN20P56880 219 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 RAB35Q15286 201 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF534Q76KX8 674 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 OR11L1Q8NGX0 322 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 C1QTNF3Q9BXJ4 246 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 NXT1Q9UKK6 140 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 CBY1Q9Y3M2 126 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SDK1Q7Z5N4 2213 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SCN8AQ9UQD0 1980 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 AHDC1Q5TGY3 1603 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FUCA1P04066 466 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 GYPBP06028 91 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF44P15621 663 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ACHEP22303 614 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 RAB6CQ53S08 254 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 IER5LQ5T953 404 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 FCRL6Q6DN72 434 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 H3F3CQ6NXT2 135 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 COX15Q7KZN9 410 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 PRR18Q8N4B5 295 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 NAT6Q93015 286 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 C19orf43Q9BQ61 176 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 RAB6CQ9H0N0 254 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 PAPPAQ13219 1627 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF587BE7ETH6 402 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 EXOSC7Q15024 291 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DPPA2Q7Z7J5 298 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 STT3BQ8TCJ2 826 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 DCLRE1CQ96SD1 692 aaKnown RBP7.07□□□□□ -1.28
SF3B3-201ENST00000302516 OPA3Q9H6K4 179 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 SLAMF8Q9P0V8 285 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 OR52A1Q9UKL2 312 aa7.07□□□□□ -1.28
SF3B3-201ENST00000302516 MAGEB4O15481 346 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 F3P13726 295 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 SELEP16581 610 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 YPEL5P62699 121 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 SYT14P1Q58G82 188 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 IL34Q6ZMJ4 242 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 NAXDQ8IW45 347 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 GPR55Q9Y2T6 319 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 HRH3Q9Y5N1 445 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 A0A0A6YYJ9 748 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 SOD1P00441 154 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 OTX2P32243 289 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 TLE1Q04724 770 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 RNF212Q495C1 297 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 PAN3Q58A45 887 aaKnown RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 B3GNT9Q6UX72 402 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 OR13C8Q8NGS7 320 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 A0A087WZY1 265 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 PPP5D1E7EU14 171 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 J3KTA2 159 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 LGALS8O00214 317 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 MGMTP16455 207 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 PIGAP37287 484 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 IHHQ14623 411 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 SYPL1Q16563 259 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 CLLU1OSQ5K130 101 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 OR10Z1Q8NGY1 313 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 VSX1Q9NZR4 365 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 ADAMTS5Q9UNA0 930 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 FCGR2AP12318 317 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 ANXA7P20073 488 aaKnown RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 NME2P22392 152 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 CCR6P51684 374 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 UBE2G2P60604 165 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 AGBL4Q5VU57 503 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 LIPIQ6XZB0 460 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 MCATQ8IVS2 390 aaKnown RBP7.06□□□□□ -1.28
SF3B3-201ENST00000302516 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 ADOQ96SZ5 270 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 GMLQ99445 158 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 SPACA1Q9HBV2 294 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 FBXL2Q9UKC9 423 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 hCG_1809904A0A1W2PP81 198 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 A0A1W2PPE2 198 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 A0A1W2PR64 198 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 A0A1W2PRV1 198 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM72A0PK05 275 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 LDB3O75112 727 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 CLDN1O95832 211 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 CD14P08571 375 aa7.06□□□□□ -1.28
SF3B3-201ENST00000302516 CSF3P09919 207 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms