RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 PTPMT1Q8WUK0 201 aaPredicted RBP9.2□□□□□ -0.94
FOXN4-201ENST00000299162 ZDHHC12Q96GR4 267 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 WDFY2Q96P53 400 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF649Q9BS31 505 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 ACTR6Q9GZN1 396 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 PRDM6Q9NQX0 595 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 CLDN16Q9Y5I7 305 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 TLCD2A6NGC4 264 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 OR8G3PP0DMU2 310 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 SQSTM1Q13501 440 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 C14orf28Q4W4Y0 310 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 SLC25A30Q5SVS4 291 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 RNF113BQ8IZP6 322 aaKnown RBP9.2□□□□□ -0.94
FOXN4-201ENST00000299162 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 ABHD4Q8TB40 342 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 SLC2A12Q8TD20 617 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 C3orf49Q96BT1 292 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 TBL1XR1Q9BZK7 514 aa9.2□□□□□ -0.94
FOXN4-201ENST00000299162 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TMEM72A0PK05 275 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 L7N2F9 121 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 ARPC5O15511 151 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 EIF4EP06730 217 aaKnown RBP9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TPOP07202 933 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 UCHL1P09936 223 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 SELENOPP49908 381 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 EFNA3P52797 238 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 MELKQ14680 651 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 HES5Q5TA89 166 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 MRGPREQ86SM8 312 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 NANPQ8TBE9 248 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 SFXN2Q96NB2 322 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TIMP4Q99727 224 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 NPAS1Q99742 590 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 NUDT9Q9BW91 350 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 GSX2Q9BZM3 304 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 ULBP3Q9BZM4 244 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 OR11A1Q9GZK7 315 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TSPAN10Q9H1Z9 355 aaPredicted RBP9.19□□□□□ -0.94
FOXN4-201ENST00000299162 DPAGT1Q9H3H5 408 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 PPP1R3EQ9H7J1 279 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 FGF21Q9NSA1 209 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 SHISA8B8ZZ34 492 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 DCTN6O00399 190 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 IGHA1P01876 353 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 FABP1P07148 127 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 PTHLHP12272 177 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 MEOX2P50222 304 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 UBE2MP61081 183 aaKnown RBP9.19□□□□□ -0.94
FOXN4-201ENST00000299162 CFHR1Q03591 330 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 PUDPQ08623 228 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TOMM20Q15388 145 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 LPAL2Q16609 132 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 MANEAQ5SRI9 462 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 ZCCHC12Q6PEW1 402 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 SLC35D2Q76EJ3 337 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF485Q8NCK3 441 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 THEM6Q8WUY1 208 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 THAP4Q8WY91 577 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 MED17Q9NVC6 651 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 C14orf105Q9NVL8 296 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF69Q9UC07 566 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 VDAC3Q9Y277 283 aa9.19□□□□□ -0.94
FOXN4-201ENST00000299162 EXOGQ9Y2C4 368 aaKnown RBP9.19□□□□□ -0.94
FOXN4-201ENST00000299162 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SPDEFO95238 335 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 TCRBP04435 133 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 FBLP22087 321 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 MAP3K8P41279 467 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 CDKN2AP42771 156 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 FASLGP48023 281 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 HOXA1P49639 335 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 AKR1C2P52895 323 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 GBX2P52951 348 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 PLCXD2Q0VAA5 305 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 C4orf46Q504U0 113 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ARHGAP11AQ6P4F7 1023 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 TMEM88Q6PEY1 159 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ATRAIDQ6UW56 229 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SLC35F2Q8IXU6 374 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ARIH2OSQ8N7S6 290 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 OR6N2Q8NGY6 317 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 GPR119Q8TDV5 335 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 C8orf44Q96CB5 159 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 WDR89Q96FK6 387 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 CNN2Q99439 309 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF768Q9H5H4 540 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 TMEM185BQ9H7F4 350 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 FKRPQ9H9S5 495 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF275Q9NSD4 429 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 A0A1W2PR77 199 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 LMO7DNF2Z398 122 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 BCAT2O15382 392 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 PIAS2O75928 621 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms