RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
PRDM9-201ENST00000296682 AMELYQ99218 206 aa8.43□□□□□ -1.06
PRDM9-201ENST00000296682 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
PRDM9-201ENST00000296682 ALG5Q9Y673 324 aa8.43□□□□□ -1.06
PRDM9-201ENST00000296682 H0YC42 278 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ITGA10O75578 1167 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GLCEO94923 617 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 RBM34P42696 430 aaKnown RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF41P51814 821 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 EFNA3P52797 238 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 DCDP81605 110 aaKnown RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 EGR4Q05215 589 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SPOCK1Q08629 439 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SKP2Q13309 424 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 OR1N1Q8NGS0 311 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 CCDC74BQ96LY2 380 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 TSPAN32Q96QS1 320 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ELL3Q9HB65 397 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SLCO1C1Q9NYB5 712 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 NPAP1Q9NZP6 1156 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 CLDN16Q9Y5I7 305 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF354AO60765 605 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ADRB1P08588 477 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GSTT2P0CG29 244 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GSTT2BP0CG30 244 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GIMD1P0DJR0 217 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ACY1Q03154 408 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 POU4F2Q12837 409 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM176BQ3YBM2 270 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM69Q5SWH9 247 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 OR51D1Q8NGF3 324 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 TXNDC15Q96J42 360 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 NRIP3Q9NQ35 241 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 WNT16Q9UBV4 365 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 PCDHGB2Q9Y5G2 931 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 PCNX3Q9H6A9 2034 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 A0A1W2PQM1 296 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 MEN1O00255 615 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 DHFRP00374 187 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SDHAP31040 664 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GUCA1AP43080 201 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 MTNR1BP49286 362 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GPR85P60893 370 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 GPR176Q14439 515 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 NR0B2Q15466 257 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ATG4DQ86TL0 474 aaPredicted RBP8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SIAH3Q8IW03 269 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SLC43A2Q8N370 569 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 OR7G1Q8NGA0 311 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 OR14A16Q8NHC5 309 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SYNPRQ8TBG9 265 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 NPRL2Q8WTW4 380 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SPACA5Q96QH8 159 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 KLHL13Q9P2N7 655 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 KLK11Q9UBX7 282 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SPATA2Q9UM82 520 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 POLHQ9Y253 713 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 RCE1Q9Y256 329 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF281Q9Y2X9 895 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 MMACHCQ9Y4U1 282 aa8.42□□□□□ -1.06
PRDM9-201ENST00000296682 SPTA1P02549 2419 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 IGHV3-15A0A0B4J1V0 119 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 A0A1B0GTQ1 180 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FAM172BPA6NC97 362 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM221A6NGB7 291 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 VSTM2BA6NLU5 285 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SLC19A2O60779 497 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 IGF2P01344 180 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 MST1P26927 711 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 GPLD1P80108 840 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SGCAQ16586 387 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 MESTQ5EB52 335 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 C1QTNF12Q5T7M4 302 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 EEF1A1P5Q5VTE0 462 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 FAM205BPQ63HN1 556 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SLC25A25Q6KCM7 469 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RPL22L1Q6P5R6 122 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ARIH2OSQ8N7S6 290 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF501Q96CX3 271 aaPredicted RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 SMIM19Q96E16 107 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 KLHL15Q96M94 604 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF578Q96N58 590 aaPredicted RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CMKLR1Q99788 373 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF426Q9BUY5 554 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CGGBP1Q9UFW8 167 aaPredicted RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 EMC9Q9Y3B6 208 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 V9GY05 133 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 TNRC6BQ9UPQ9 1833 aaKnown RBP8.41□□□□□ -1.06
PRDM9-201ENST00000296682 CPAMD8Q8IZJ3 1885 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 RALGAPA1Q6GYQ0 2036 aa8.41□□□□□ -1.06
PRDM9-201ENST00000296682 ZFHX2Q9C0A1 2572 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms