RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 BAK1Q16611 211 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 WBP2NLQ6ICG8 309 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ASCL5Q7RTU5 278 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ABHD12BQ7Z5M8 362 aaPredicted RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ADGRF3Q8IZF5 1079 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 TP53I13Q8NBR0 393 aaPredicted RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 BBS1Q8NFJ9 593 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 NPRL2Q8WTW4 380 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 MIB2Q96AX9 1013 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ANKRD19PQ9H560 264 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 TMEM129A0AVI4 362 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 NME1P15531 152 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ELK1P19419 428 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ID4P47928 161 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ERVK-16P61578 105 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ACSM1Q08AH1 577 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 CNN3Q15417 329 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC9A3R2Q15599 337 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 FOXB2Q5VYV0 432 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 MBOAT2Q6ZWT7 520 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 GDPD3Q7L5L3 318 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 SSX9Q7RTT3 188 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR52I1Q8NGK6 324 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 DIO2Q92813 273 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 STRADBQ9C0K7 418 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 MBNL1Q9NR56 388 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ADAM18Q9Y3Q7 739 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 C1orf105O95561 183 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 PRLHRP49683 370 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 MELKQ14680 651 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 STEAP1BQ6NZ63 245 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 NAXDQ8IW45 347 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZNF100Q8IYN0 542 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ZFP82Q8N141 532 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR56B1Q8NGI3 324 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC25A46Q96AG3 418 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 RBM24Q9BX46 236 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR10A5Q9H207 317 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 A0A0U1RQK1 487 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 STK17BO94768 372 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 CLEC2LP0C7M8 214 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 ELAVL4P26378 380 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 HTR3AP46098 478 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 CHRNEQ04844 493 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 GAB1Q13480 694 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 TRAPPC6BQ86SZ2 158 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR9A4Q8NGU2 314 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 C22orf15Q8WYQ4 148 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 MR1Q95460 341 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 C20orf85Q9H1P6 137 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 RAB9BQ9NP90 201 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC6A20Q9NP91 592 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
SYNGAP1-201ENST00000293748 NPIPA5A0A0B4J1W7 369 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NPIPA7E9PJI5 369 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 ITGB2P05107 769 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 GIPP09681 153 aaPredicted RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NPIPA8P0DM63 369 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR8G3PP0DMU2 310 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 CTSCP53634 463 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 GP2P55259 537 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NUMA1Q14980 2115 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR7E24Q6IFN5 339 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 TECPR1Q7Z6L1 1165 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SLC43A2Q8N370 569 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR13C2Q8NGS9 318 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR4K15Q8NH41 348 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 PPP1R35Q8TAP8 253 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 DYNC2LI1Q8TCX1 351 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SEC22AQ96IW7 307 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SFXN2Q96NB2 322 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NOX4Q9NPH5 578 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SIDT1Q9NXL6 827 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 AGAP14A8MT82 685 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 MSTNO14793 375 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 PPP1R2P9O14990 202 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SULT1C4O75897 302 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SERPINF1P36955 418 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 PFN3P60673 137 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 MFGE8Q08431 387 aaPredicted RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 PLPP5Q8NEB5 264 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 OR4D6Q8NGJ1 314 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 TMEM106AQ96A25 262 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 TIMM29Q9BSF4 260 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 SDHAF2Q9NX18 166 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 PCYT1BQ9Y5K3 369 aaPredicted RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 WIF1Q9Y5W5 379 aa10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-201ENST00000293748 LNP1A1A4G5 178 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 F5H5K5 113 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 PIAS2O75928 621 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 FPR3P25089 353 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms