RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 FAM212BQ9NTI7 297 aaPredicted RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 WASF3Q9UPY6 502 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 KCNIP3Q9Y2W7 256 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PEX16Q9Y5Y5 336 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 CELSR3Q9NYQ7 3312 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 FITM1A5D6W6 292 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PGPEP1LA6NFU8 196 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 KLF4O43474 513 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PRAMEF2O60811 474 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 LY86O95711 162 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 GABRA3P34903 492 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SOX18P35713 384 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 CEBPGP53567 150 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PER3P56645 1201 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 NCS1P62166 190 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ID2Q02363 134 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 NHLH1Q02575 133 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 IL24Q13007 206 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 MLLT11Q13015 90 aaPredicted RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 CNN3Q15417 329 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SPHARQ15513 63 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF404Q494X3 552 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SYT14P1Q58G82 188 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF761Q86XN6 746 aaPredicted RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 CMIPQ8IY22 773 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SLC34A3Q8N130 599 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 C9orf62Q8N4C0 152 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 OR52R1Q8NGF1 315 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 MCFD2Q8NI22 146 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 MRGPRDQ8TDS7 321 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 FAM46AQ96IP4 442 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF582Q96NG8 517 aaPredicted RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 DGAT2Q96PD7 388 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SLIRPQ9GZT3 109 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 TMEM27Q9HBJ8 222 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PRTFDC1Q9NRG1 225 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 FBXO34Q9NWN3 711 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SOHLH2Q9NX45 425 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 DNAJC27Q9NZQ0 273 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 SLC7A7Q9UM01 511 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 EXOSC1Q9Y3B2 195 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 CDH10Q9Y6N8 788 aa6.92□□□□□ -1.3
TRIM42-201ENST00000286349 TDRD6O60522 2096 aaKnown RBP6.92□□□□□ -1.3
TRIM42-201ENST00000286349 PCDH15Q96QU1 1955 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 LNP1A1A4G5 178 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 SLC22A23A1A5C7 686 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 A6NLC8 198 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 M0R129 80 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 GTPBP1O00178 669 aaKnown RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 UBE2CO00762 179 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 SURF4O15260 269 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 CBX7O95931 251 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 SPNP16150 400 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 DRD5P21918 477 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 GADD45AP24522 165 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 PSMA1P25786 263 aaKnown RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 PSMB6P28072 239 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 LCN1P31025 176 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 THBS4P35443 961 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF136P52737 540 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 PPP1CAP62136 330 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 TNFRSF9Q07011 255 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 MOGAT2Q3SYC2 334 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 C14orf28Q4W4Y0 310 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 MRPL2Q5T653 305 aaKnown RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ATPAF1Q5TC12 328 aaPredicted RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF620Q6ZNG0 422 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 MED25Q71SY5 747 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF550Q7Z398 422 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 WDR53Q7Z5U6 358 aaPredicted RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 HMGN2P46Q86SG4 172 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 GCNT2Q8N0V5 402 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 OR2T33Q8NG76 320 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 OR52L1Q8NGH7 329 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 SAP25Q8TEE9 199 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 FGF11Q92914 225 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 MVB12AQ96EY5 273 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 TAPBPLQ9BX59 468 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 HDHD5Q9BXW7 423 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ALOXE3Q9BYJ1 711 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 Q9N2J8 555 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 FGF20Q9NP95 211 aaPredicted RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 PRODH2Q9UF12 536 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 LSM2Q9Y333 95 aaKnown RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 CCDC88CQ9P219 2028 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 A0A0A6YYC8 382 aaPredicted RBP6.91□□□□□ -1.3
TRIM42-201ENST00000286349 hCG_1807616A0A1W2PRN6 198 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 TMEM129A0AVI4 362 aa6.91□□□□□ -1.3
TRIM42-201ENST00000286349 E9PI62 339 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms