RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RPS6KA3P51812 740 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 RAP1BP61224 184 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 RPL27P61353 136 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 LCN6P62502 163 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 RPS4XP62701 263 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 RAP1AP62834 184 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 FMODQ06828 376 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 KRR1Q13601 381 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 ANKDD1AQ495B1 522 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 FAM205BPQ63HN1 556 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 OR2T5Q6IEZ7 315 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 ANKRD16Q6P6B7 361 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 SLC22A25Q6T423 547 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 TMEM108Q6UXF1 575 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 ZNF704Q6ZNC4 412 aaPredicted RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 TMPRSS11FQ6ZWK6 438 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 SSX8Q7RTT4 187 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 PIWIL3Q7Z3Z3 882 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 WDFY1Q8IWB7 410 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 C20orf196Q8IYI0 205 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 ADGRG5Q8IZF4 528 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 DEPDC4Q8N2C3 294 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 AQP11Q8NBQ7 271 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 KBTBD8Q8NFY9 601 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 OR52L1Q8NGH7 329 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 OR2T29Q8NH02 315 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 GNPDA2Q8TDQ7 276 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 LIPHQ8WWY8 451 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 NSMAFQ92636 917 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 HTRA1Q92743 480 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 GTPBP3Q969Y2 492 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 ZNF837Q96EG3 531 aaPredicted RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 DHRS1Q96LJ7 313 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 MUS81Q96NY9 551 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 TSPAN32Q96QS1 320 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 FOXB1Q99853 325 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 IFT27Q9BW83 186 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 MMADHCQ9H3L0 296 aaPredicted RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 TXNIPQ9H3M7 391 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 DENND2DQ9H6A0 471 aaPredicted RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 RNF121Q9H920 327 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 CCM2LQ9NUG4 571 aaPredicted RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 TBC1D23Q9NUY8 699 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 GLTPQ9NZD2 209 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 KIF17Q9P2E2 1029 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 ZNF346Q9UL40 294 aaKnown RBP5.73□□□□□ -1.49
CD44-204ENST00000279452 PLEKHA6Q9Y2H5 1048 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 ADAM18Q9Y3Q7 739 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 LYVE1Q9Y5Y7 322 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 DOPEY1Q5JWR5 2465 aa5.73□□□□□ -1.49
CD44-204ENST00000279452 TEX13CA0A0J9YWL9 993 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PDLIM1O00151 329 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 DHHO43323 396 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 KLF4O43474 513 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 FKBP6O75344 327 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ENTPD5O75356 428 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 TIPRLO75663 272 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SOX14O95416 240 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 RAB36O95755 333 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PLAUP00749 431 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 HLA-HP01893 362 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 CD14P08571 375 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 DNASE1P24855 282 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 FPR3P25089 353 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 GUCA1AP43080 201 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 MAGEA2P43356 314 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 LIMS1P48059 325 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PTDSS1P48651 473 aaKnown RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 IDH3GP51553 393 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 ARHGDIAP52565 204 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 CDH11P55287 796 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 RUNX1T1Q06455 604 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PIGFQ07326 219 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SPOCK1Q08629 439 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SGCAQ16586 387 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 GSG1Q2KHT4 349 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 IQCCQ4KMZ1 466 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 CLEC12AQ5QGZ9 265 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 NCMAPQ5T1S8 102 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PGBD2Q6P3X8 592 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 PGM2L1Q6PCE3 622 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SMARCD3Q6STE5 483 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ZER1Q7Z7L7 766 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 JAZF1Q86VZ6 243 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 LRRC18Q8N456 261 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 LINC00471Q8N535 108 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 CLDN22Q8N7P3 220 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 WDR31Q8NA23 367 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 OR10G2Q8NGC3 310 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 MAGEE2Q8TD90 523 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
CD44-204ENST00000279452 HDAC2Q92769 488 aaKnown RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 TMEM54Q969K7 222 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 MCHR2Q969V1 340 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 RASD2Q96D21 266 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 LRR1Q96L50 414 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 Q96M85 177 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ERMAPQ96PL5 475 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 RBP7Q96R05 134 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms