RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 IL17CQ9P0M4 197 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 TESQ9UGI8 421 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 GDF2Q9UK05 429 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 PCOLCE2Q9UKZ9 415 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 V9GY05 133 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 THBS2P35442 1172 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 F2RL1P55085 397 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 RPS25P62851 125 aaKnown RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 HRASLS5Q96KN8 279 aa5.3□□□□□ -1.56
VCAN-201ENST00000265077 PARD6GQ9BYG4 376 aaPredicted RBP5.3□□□□□ -1.56
VCAN-201ENST00000265077 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 GLTPD2A6NH11 291 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 DUX1O43812 170 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 AKR1C3P42330 323 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SRPXP78539 464 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 RPL22L1Q6P5R6 122 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 HCAR1Q9BXC0 346 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TM7SF3Q9NS93 570 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TMEM218A2RU14 115 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SRPX2O60687 465 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 MMP7P09237 267 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 IRS1P35568 1242 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR3A1P47881 315 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 CTXN1P60606 82 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 ID2Q02363 134 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TOMM20LQ6UXN7 152 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 GPRIN1Q7Z2K8 1008 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SPRYD4Q8WW59 207 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 BORCS7Q96B45 105 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SMIM12Q96EX1 92 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 MARVELD1Q9BSK0 173 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 BOCQ9BWV1 1114 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 MOB1AQ9H8S9 216 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 CSPG4Q6UVK1 2322 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TRAV18A0A075B6X5 111 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 RNGTTO60942 597 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 GPR32O75388 356 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 NCR1O76036 304 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PIN1Q13526 163 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 FRMPD2BQ6IN97 320 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 C11orf42Q8N5U0 333 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TMEM239Q8WW34 195 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 RASD2Q96D21 266 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 RNF167Q9H6Y7 350 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PATZ1Q9HBE1 687 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 SRA1Q9HD15 236 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 NDUFB11Q9NX14 153 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 MEIKINA0A087WXM9 373 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 A0A1W2PPH5 198 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PLSCR5A0PG75 271 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 GABRR3A8MPY1 467 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PMS2P2O95744 297 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SLC10A3P09131 477 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PITX1P78337 314 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 EBPQ15125 230 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TMEM156Q8N614 296 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR4F15Q8NGB8 312 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 DPF1Q92782 380 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 C20orf27Q9GZN8 174 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 FZD3Q9NPG1 666 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 MED9Q9NWA0 146 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 BET1LQ9NYM9 111 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 ZNF281Q9Y2X9 895 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 CACNA1AO00555 2505 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 A8MXE2 369 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 FZD9O00144 591 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 GABRPO00591 440 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PEX12O00623 359 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SERPINA7P05543 415 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR2T7P0C7T2 308 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 TBXA2RP21731 343 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 CAV3P56539 151 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 NSUN5P2Q63ZY6 315 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 UEVLDQ8IX04 471 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 CLECL1Q8IZS7 167 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR56B2PQ8NGI1 322 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR2T27Q8NH04 317 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 THAP3Q8WTV1 239 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 WDFY2Q96P53 400 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PCDHB10Q9UN67 800 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR5H15A6NDH6 313 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OR5H1A6NKK0 313 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SYT7O43581 403 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 DPM1O60762 260 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 SNRPGP62308 76 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 IFITM3Q01628 133 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 THNSL2Q86YJ6 484 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 EXD3Q8N9H8 876 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 NLGN4YQ8NFZ3 816 aaPredicted RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 PHYHIPLQ96FC7 376 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 PDLIM5Q96HC4 596 aaKnown RBP5.29□□□□□ -1.56
VCAN-201ENST00000265077 AKR1E2Q96JD6 320 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 GGACTQ9BVM4 153 aa5.29□□□□□ -1.56
VCAN-201ENST00000265077 ZNF552Q9H707 407 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms