RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 EIF1AXP47813 144 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 OR4N5Q8IXE1 308 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 DMBX1Q8NFW5 382 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 OR51D1Q8NGF3 324 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 RSPRY1Q96DX4 576 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 Q96M85 177 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF75AQ96N20 296 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 PTCHD1Q96NR3 888 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 TEX101Q9BY14 249 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 GNB5O14775 395 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 NAT2P11245 290 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 ADH5P11766 374 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 CASRP41180 1078 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 ACAA2P42765 397 aaKnown RBP11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 POU3F4P49335 361 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 PRKXP51817 358 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 GUCA2AQ02747 115 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 GUCA2BQ16661 112 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 H3F3CQ6NXT2 135 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF614Q8N883 585 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 STOML3Q8TAV4 291 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 RNF141Q8WVD5 230 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 FAM3DQ96BQ1 224 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 MRM2Q9UI43 246 aaKnown RBP11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM14AQ9Y6G1 99 aa11.27□□□□□ -0.6
CHMP2B-201ENST00000263780 TET1Q8NFU7 2136 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 RNF222A6NCQ9 220 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 PHYHO14832 338 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 CYB5AP00167 134 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 AMY2AP04746 511 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 NAAAQ02083 359 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 DHRS2Q13268 280 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 MEF2DQ14814 521 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 YOD1Q5VVQ6 348 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 LEG1Q6P5S2 330 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC39A5Q6ZMH5 540 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 IL34Q6ZMJ4 242 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 TMEM106AQ96A25 262 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 ATG5Q9H1Y0 275 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 MYEF2Q9P2K5 600 aaKnown RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 DAPP1Q9UN19 280 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC22A7Q9Y694 548 aa11.27□□□□□ -0.61
CHMP2B-201ENST00000263780 TRAV8-7A0A075B6U6 113 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 A6NJ64 397 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 LRRC72A6NJI9 287 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC17A2O00624 439 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 LDB3O75112 727 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 ADH1CP00326 375 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 APEHP13798 732 aaKnown RBP11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 GRPRP30550 384 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 P2RY2P41231 377 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 MAP3K8P41279 467 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 RAB5BP61020 215 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 EGR3Q06889 387 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 C2orf76Q3KRA6 126 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 PPP1R1CQ8WVI7 109 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 DVL3Q92997 716 aaPredicted RBP11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 MCHR2Q969V1 340 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC25A28Q96A46 364 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 LYRM4Q9HD34 91 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 PHPT1Q9NRX4 125 aaPredicted RBP11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 LAMP5Q9UJQ1 280 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 OR10H1Q9Y4A9 318 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 COLEC10Q9Y6Z7 277 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 TBC1D3IA0A087WXS9 549 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 NKX2-2O95096 273 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 PLA2G7Q13093 441 aa11.26□□□□□ -0.61
CHMP2B-201ENST00000263780 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms