RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 BPIFB6Q8NFQ5 453 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 LHFPL5Q8TAF8 219 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 HIST1H2ACQ93077 130 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 DACH2Q96NX9 599 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 ASPNQ9BXN1 380 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 GRIP1Q9Y3R0 1128 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 CDH10Q9Y6N8 788 aa24.57■■□□□ 1.52
SMARCD3-201ENST00000262188 AQP7O14520 342 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 GABARAPO95166 117 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 HLA-DOBP13765 273 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 AHCYP23526 432 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 UQCRC1P31930 480 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 TDGF1P3P51864 188 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 PTGES3Q15185 160 aaKnown RBP24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 SMARCD3Q6STE5 483 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 OR10Z1Q8NGY1 313 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 FUNDC2Q9BWH2 189 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 TSSK6Q9BXA6 273 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 GABARAPL3Q9BY60 117 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 FAM118AQ9NWS6 357 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 TRAPPC4Q9Y296 219 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 PLPP3O14495 311 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 P2RY4P51582 365 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 DBPQ10586 325 aaPredicted RBP24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 SGCBQ16585 318 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 MEIOBQ8N635 442 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 OR4Q3Q8NH05 313 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 CHST11Q9NPF2 352 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 MRPL39Q9NYK5 338 aaKnown RBP24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 HIF3AQ9Y2N7 669 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 ADAM18Q9Y3Q7 739 aa24.56■■□□□ 1.52
SMARCD3-201ENST00000262188 MS4A18H0YCH9 400 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 SFTPCP11686 197 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 SLC35A1P78382 337 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 MS4A18Q3C1V0 323 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 ARHGAP11AQ6P4F7 1023 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 OR6S1Q8NH40 331 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 MUL1Q969V5 352 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 RPRD1BQ9NQG5 326 aaKnown RBP24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 KALRNO60229 2985 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 KIAA1549Q9HCM3 1950 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 IGSF10Q6WRI0 2623 aa24.55■■□□□ 1.52
SMARCD3-201ENST00000262188 M0R3G1 203 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 SMAD9O15198 467 aaKnown RBP24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 YES1P07947 543 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 CTF1Q16619 201 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 RFX4Q33E94 735 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 ACSM5Q6NUN0 579 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 XKRXQ6PP77 449 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 H1FNTQ75WM6 255 aaPredicted RBP24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 HDDC2Q7Z4H3 204 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 PPP1R3DO95685 299 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 RPL4P36578 427 aaKnown RBP24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 CBX5P45973 191 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 RAC3P60763 192 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 CSNK2A1P68400 391 aaPredicted RBP24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 RIPPLY1Q0D2K3 151 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 GINS1Q14691 196 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 GPAT4Q86UL3 456 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 ZBTB46Q86UZ6 589 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 TEX47Q8TBZ9 253 aa24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 DDX28Q9NUL7 540 aaKnown RBP24.54■■□□□ 1.52
SMARCD3-201ENST00000262188 RNF13O43567 381 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 DEFA1P59665 94 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 DEFA3P59666 94 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ERVK-25P63136 954 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ADARB1P78563 741 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 TOP3AQ13472 1001 aaPredicted RBP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ALG10Q5BKT4 473 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ADCK1Q86TW2 530 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 GHDCQ8N2G8 530 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 LRRC75AQ8NAA5 344 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 IL17RDQ8NFM7 739 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 UBE2FQ969M7 185 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 IFT27Q9BW83 186 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ALPK2Q86TB3 2170 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 NDUFB2O95178 105 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 RCBTB2O95199 551 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 TSPAN19P0C672 248 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 CPN1P15169 458 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 H3F3AP84243 136 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 PON3Q15166 354 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ZNF239Q16600 458 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 SLC35F1Q5T1Q4 408 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 CCDC71Q8IV32 467 aaPredicted RBP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 WDFY1Q8IWB7 410 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 POC5Q8NA72 575 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 OR5H6Q8NGV6 325 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 FNDC9Q8TBE3 224 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ZNF775Q96BV0 537 aaPredicted RBP24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 ACOXLQ9NUZ1 547 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 B3GAT1Q9P2W7 334 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 AASSQ9UDR5 926 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 A3GALT2U3KPV4 340 aa24.53■■□□□ 1.52
SMARCD3-201ENST00000262188 AQP7P3A6NL99 342 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 OR6A2O95222 327 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 APOA1P02647 267 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 PUDPQ08623 228 aa24.52■■□□□ 1.52
SMARCD3-201ENST00000262188 GTF3C1Q12789 2109 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms