RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 POU2F1P14859 743 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 GABRA1P14867 456 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 ELK1P19419 428 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 PITPNBP48739 271 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 SELENOPP49908 381 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 GABREP78334 506 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 RELQ04864 619 aaPredicted RBP17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 TSEN54Q7Z6J9 526 aaKnown RBP17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 MORN4Q8NDC4 146 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR5M3Q8NGP4 307 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR2Y1Q8NGV0 311 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 CT55Q8WUE5 264 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 NUDT9Q9BW91 350 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 PAPOLGQ9BWT3 736 aaKnown RBP17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 SAP130Q9H0E3 1048 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC25A32Q9H2D1 315 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 BCL2L10Q9HD36 194 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 ACAD8Q9UKU7 415 aa17.2■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRF1P14222 555 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 GABRA3P34903 492 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 ARHGAP11BQ3KRB8 267 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 CPEB2Q7Z5Q1 589 aaKnown RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR9Q2Q8NGE9 314 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR1N1Q8NGS0 311 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 BBS10Q8TAM1 723 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 CNOT9Q92600 299 aaKnown RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 GTPBP3Q969Y2 492 aaKnown RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 LCORQ96JN0 433 aaPredicted RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 DLL3Q9NYJ7 618 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 COPS7AQ9UBW8 275 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 C19orf25Q9UFG5 118 aaPredicted RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 MIOXQ9UGB7 285 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 CD63P08962 238 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 TCN2P20062 427 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 GIFP27352 417 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 HMGA2P52926 109 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 RAP2BP61225 183 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 FABP5Q01469 135 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 OCLNQ16625 522 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 AVPI1Q5T686 147 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRAMEF8Q5VWM4 474 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRAMEF7Q5VXH5 474 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 DEF8Q6ZN54 512 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC16A13Q7RTY0 426 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 TOMM5Q8N4H5 51 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF565Q8N9K5 539 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 OR8J1Q8NGP2 316 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 HSD17B8Q92506 261 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 MS4A3Q96HJ5 214 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC46A1Q96NT5 459 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 WDR77Q9BQA1 342 aaPredicted RBP17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 SLC38A1Q9H2H9 487 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 CALML5Q9NZT1 146 aa17.19■□□□□ 0.34
COL4A3BP-201ENST00000261415 GXYLT2A0PJZ3 443 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 TMEM229AB2RXF0 380 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 ATG12O94817 140 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 GIPP09681 153 aaPredicted RBP17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 CT45A8P0DMV1 189 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 CT45A9P0DMV2 189 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 PTAFRP25105 342 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 FOLR3P41439 243 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 IFI44LQ53G44 452 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 CT45A2Q5DJT8 189 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 FAM76BQ5HYJ3 339 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 DCST2Q5T1A1 773 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 PAPD4Q6PIY7 484 aaKnown RBP17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 PAQR6Q6TCH4 344 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 LYPD4Q6UWN0 246 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 NPSR1Q6W5P4 371 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 TMPRSS7Q7RTY8 843 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 SPAG16Q8N0X2 631 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 SVBPQ8N300 66 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 PXT1Q8NFP0 134 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF607Q96SK3 696 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 SDF2Q99470 211 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 THSD1Q9NS62 852 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 DNAJC27Q9NZQ0 273 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 EEF1E1O43324 174 aaKnown RBP17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 ITGA10O75578 1167 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZIC2O95409 532 aaPredicted RBP17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 RAB40ALP0C0E4 278 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 NNATQ16517 81 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 SGCAQ16586 387 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 LPAR4Q99677 370 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 DSPPQ9NZW4 1301 aa17.18■□□□□ 0.34
COL4A3BP-201ENST00000261415 FCMRO60667 390 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 AQP8O94778 261 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 AK1P00568 194 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 FBP1P09467 338 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SPP1P10451 314 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 KCNJ3P48549 501 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 TEX30Q5JUR7 227 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 CASP12Q6UXS9 341 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 FRRS1Q6ZNA5 592 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 PRICKLE2Q7Z3G6 844 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 SPICQ8N5J4 248 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 ARL6IP6Q8N6S5 226 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 ZNF527Q8NB42 609 aa17.17■□□□□ 0.34
COL4A3BP-201ENST00000261415 NFAM1Q8NET5 270 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms