RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DPH1Q9BZG8 443 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 LAT2Q9GZY6 243 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 REEP1Q9H902 201 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 TMEM27Q9HBJ8 222 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DCAF16Q9NXF7 216 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 UPB1Q9UBR1 384 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1W2PQD3 144 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 RHPN2P1A8MT19 583 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PLPP3O14495 311 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ITGA10O75578 1167 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 REM1O75628 298 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 GABARAPO95166 117 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 TFF1P04155 84 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC35G6P0C7Q6 338 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CD46P15529 392 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 EVI2BP34910 448 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 STARP49675 285 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF121P58317 390 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ARPC4P59998 168 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 FOXF1Q12946 379 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC22A6Q4U2R8 563 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 C11orf87Q6NUJ2 197 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 TTC33Q6PID6 262 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 KLHL24Q6TFL4 600 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 RANBP3LQ86VV4 465 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DHFR2Q86XF0 187 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OR10H5Q8NGA6 315 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OMA1Q96E52 524 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 LOXL4Q96JB6 756 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PRRX2Q99811 253 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SCNM1Q9BWG6 230 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PLA2G3Q9NZ20 509 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ICMTO60725 284 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 WDPCPO95876 746 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 EDN3P14138 238 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SELEP16581 610 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TNFSF10P50591 281 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 RAB15P59190 212 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ABLIM2Q6H8Q1 611 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 IRGCQ6NXR0 463 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 NIPAL3Q6P499 406 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 GLCCI1Q86VQ1 547 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 VANGL1Q8TAA9 524 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 RFKQ969G6 155 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CLCF1Q9UBD9 225 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 GLS2Q9UI32 602 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 MKL2Q9ULH7 1088 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 UBE2QL1A1L167 161 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SCRG1O75711 98 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 UTS2O95399 124 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 AK1P00568 194 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 UBTFL6P0CB48 400 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 EIF2S3P41091 472 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 DSTNP60981 165 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 RPS7P62081 194 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 COX10Q12887 443 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CCDC92Q53HC0 331 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 OLFML2AQ68BL7 652 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ASB18Q6ZVZ8 466 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 NRMQ8IXM6 262 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CCDC36Q8IYA8 594 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ASB15Q8WXK1 588 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 GTF3AQ92664 365 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 C1GALT1C1Q96EU7 318 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CHCHD6Q9BRQ6 235 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TIGARQ9NQ88 270 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 IFT80Q9P2H3 777 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 IGHV3-15A0A0B4J1V0 119 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SYT5O00445 386 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF23P17027 643 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 BMP7P18075 431 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 MYL9P24844 172 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ARRB1P49407 418 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC36A2Q495M3 483 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 DMKNQ6E0U4 476 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TMPRSS11AQ6ZMR5 421 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TMEM156Q8N614 296 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 PLPP7Q8NBV4 271 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC37A3Q8NCC5 494 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 Q96M85 177 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 EXOSC3Q9NQT5 275 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 NKIRAS2Q9NYR9 191 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF229Q9UJW7 825 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 LIPT2A6NK58 231 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CPSF4LA6NMK7 179 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 GPIP06744 558 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 HSMCR30P0CW71 290 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 P2RY14Q15391 338 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 KRT77Q7Z794 578 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF440Q8IYI8 595 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 PRSS58Q8IYP2 241 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 RDH10Q8IZV5 341 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 SVOPLQ8N434 492 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 CAMKVQ8NCB2 501 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 WDR36Q8NI36 951 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TEX47Q8TBZ9 253 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 PIP5K1AQ99755 562 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 FUNDC2Q9BWH2 189 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms