RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PRR7Q8TB68 274 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 FAM81AQ8TBF8 368 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 UBE2FQ969M7 185 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 KCNK17Q96T54 332 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 NMNAT3Q96T66 252 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF184Q99676 751 aaPredicted RBP14□□□□□ -0.17
CCDC90B-201ENST00000260054 MRPL13Q9BYD1 178 aaKnown RBP14□□□□□ -0.17
CCDC90B-201ENST00000260054 C12orf49Q9H741 205 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 Q9UFV3 132 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 EMC9Q9Y3B6 208 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 A6NIZ1 184 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 H0YAE9 185 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 XKRYO14609 159 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 AKAP8O43823 692 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 PRKYO43930 277 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 SMNDC1O75940 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 CRHP06850 196 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 GNAO1P09471 354 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 PGA4P0DJD7 388 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 PGA3P0DJD8 388 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 HSPA13P48723 471 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 RAP1BP61224 184 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 RAP1AP62834 184 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 LGALS3BPQ08380 585 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 DBPQ10586 325 aaPredicted RBP13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 BLMHQ13867 455 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 SNAPC1Q16533 368 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 LEG1Q6P5S2 330 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 HDDC2Q7Z4H3 204 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 ADCK1Q86TW2 530 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 FJX1Q86VR8 437 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 JAZF1Q86VZ6 243 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 SYT14Q8NB59 555 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 CYB561A3Q8NBI2 242 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 NPEPL1Q8NDH3 523 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF566Q969W8 418 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC38A2Q96QD8 506 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 DDOQ99489 341 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 TEX12Q9BXU0 123 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 GPR52Q9Y2T5 361 aa13.99□□□□□ -0.17
CCDC90B-201ENST00000260054 PRSS37A4D1T9 235 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 RIIAD1A6NNX1 92 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 IGHG1P01857 330 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 PCYT1AP49585 367 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 EFNB1P98172 346 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 CRMP1Q14194 572 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 PHYHD1Q5SRE7 291 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 TMEM211Q6ICI0 200 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 USP51Q70EK9 711 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC37A3Q8NCC5 494 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 NOXO1Q8NFA2 376 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 OR6K3Q8NGY3 331 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 APH1AQ96BI3 265 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 MUS81Q96NY9 551 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 KLHL21Q9UJP4 597 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 FOXD3Q9UJU5 478 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 MYO7BQ6PIF6 2116 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 INTS1Q8N201 2190 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC22A23A1A5C7 686 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 OR6C68A6NDL8 312 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 FAM183AA6NL82 134 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC43A1O75387 559 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 IGHV3-9P01782 118 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 CTSSP25774 331 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 CLRN1P58418 232 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 CDC42P60953 191 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 FREM1Q5H8C1 2179 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 TSPO2Q5TGU0 170 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF691Q5VV52 312 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 BTLAQ7Z6A9 289 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 C20orf196Q8IYI0 205 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 TCEANCQ8N8B7 351 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 RND1Q92730 232 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 NMD3Q96D46 503 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 STARD4Q96DR4 205 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 PLEKHA8Q96JA3 519 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 IL4I1Q96RQ9 567 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 SFXN3Q9BWM7 321 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 PRRG3Q9BZD7 231 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 SYT4Q9H2B2 425 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 FN3KQ9H479 309 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF226Q9NYT6 803 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 VSX1Q9NZR4 365 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
CCDC90B-201ENST00000260054 HSPB2A8KAH6 182 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 LRRTM2O43300 516 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 TLX2O43763 284 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 UPK3AO75631 287 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 CGAP01215 116 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 IFNGP01579 166 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF3P17036 446 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 OR3A2P47893 321 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 CSNK1A1P48729 337 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 FMODQ06828 376 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 CD47Q08722 323 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 ITGADQ13349 1161 aa13.97□□□□□ -0.17
CCDC90B-201ENST00000260054 HSPB2Q16082 182 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms