RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SLC25A44Q96H78 314 aaPredicted RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 UBL7Q96S82 380 aaPredicted RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 SDF2Q99470 211 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 PUS1Q9Y606 427 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP30-201ENST00000257548 URADA6NGE7 173 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
USP30-201ENST00000257548 SNRPGP15A8MWD9 76 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 AGR2O95994 175 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 RENP00797 406 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 SOD2P04179 222 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 PRKAR1BP31321 381 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 THBS2P35442 1172 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 RAG2P55895 527 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 MRPS10P82664 201 aaKnown RBP11.29□□□□□ -0.6
USP30-201ENST00000257548 TGIF1Q15583 401 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 ZNF619Q8N2I2 560 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 FAM71CQ8NEG0 241 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 METTL21AQ8WXB1 218 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 INSM2Q96T92 566 aaPredicted RBP11.29□□□□□ -0.6
USP30-201ENST00000257548 PRR13Q9NZ81 148 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
USP30-201ENST00000257548 CSAG2Q9Y5P2 127 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 TMEM218A2RU14 115 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 A6NJ64 397 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 TGM5O43548 720 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 CLEC3AO75596 197 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 TSPAN15O95858 294 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 CTSLP07711 333 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 B2MP61769 119 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 RNLSQ5VYX0 342 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 EIF5AL1Q6IS14 154 aaKnown RBP11.29□□□□□ -0.6
USP30-201ENST00000257548 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 VITQ6UXI7 678 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 CD300LDQ6UXZ3 194 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 SLC35F3Q8IY50 421 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 KCNRGQ8N5I3 272 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 OR5K2Q8NHB8 316 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 SYNDIG1Q9H7V2 258 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 BCL2L10Q9HD36 194 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 TUBAL3A6NHL2 446 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 NPIPB8E9PQR5 432 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 ZGLP1P0C6A0 271 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 FOSL2P15408 326 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 SDHAP31040 664 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 VIPR2P41587 438 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 PWWP2BQ6NUJ5 590 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 SLC48A1Q6P1K1 146 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 ABHD13Q7L211 337 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 OVCH1Q7RTY7 1134 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 OR4K17Q8NGC6 315 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 OR52E1Q8NGJ3 308 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 TLNRD1Q9H1K6 362 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 PIPOXQ9P0Z9 390 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 FOXJ3Q9UPW0 622 aa11.29□□□□□ -0.6
USP30-201ENST00000257548 A0A087WV48 116 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TSPAN11A1L157 253 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 LINC01387J3KSC0 135 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 ADH1AP07327 375 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TYRP1P17643 537 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 PTGFRP43088 359 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TAS2R19P59542 299 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 HFEQ30201 348 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 PLEKHN1Q494U1 663 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TFAP2EQ6VUC0 442 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 GRASPQ7Z6J2 395 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 GABRG1Q8N1C3 465 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 S100A13Q99584 98 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 RSPO3Q9BXY4 272 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 SLC22A13Q9Y226 551 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 A0A087WV62 115 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 H7C1Q1 480 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 ABCD4O14678 606 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 GPRIN2O60269 458 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 FGF2P09038 288 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 SLC2A5P22732 501 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 HOXD10P28358 340 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 C21orf58P58505 322 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 BDH1Q02338 343 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TMEM35AQ53FP2 167 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 DMKNQ6E0U4 476 aaPredicted RBP11.28□□□□□ -0.6
USP30-201ENST00000257548 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 OR5T3Q8NGG3 340 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 RNF141Q8WVD5 230 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms