RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GLTPQ9NZD2 209 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 NDRG3Q9UGV2 375 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMEM14AQ9Y6G1 99 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 PRSS37A4D1T9 235 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 MRPL3P09001 348 aaKnown RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 HSD11B1P28845 292 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 B3GALT5-AS1P59052 145 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMPRSS11AQ6ZMR5 421 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 CREB3L2Q70SY1 520 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 TMEM163Q8TC26 289 aa9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
TNFAIP3-201ENST00000237289 KDM4EB2RXH2 506 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CYTIPO60759 359 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SEMA7AO75326 666 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 APEHP13798 732 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 GSTT1P30711 240 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC6A9P48067 706 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ROR2Q01974 943 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZP4Q12836 540 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 NHSL2Q5HYW2 709 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLX4IPQ5VYV7 408 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 NSUN5P2Q63ZY6 315 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 AHSA2Q719I0 299 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 TSEN54Q7Z6J9 526 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 KRT77Q7Z794 578 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CCDC71Q8IV32 467 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 LNX2Q8N448 690 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 LRRC18Q8N456 261 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SVOPQ8N4V2 548 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR6X1Q8NH79 312 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZMYND19Q96E35 227 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PITX2Q99697 317 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PRDM14Q9GZV8 571 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 EFCAB10A6NFE3 127 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ARPC3O15145 178 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 DHHO43323 396 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 TRMUO75648 421 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 POU4F2Q12837 409 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ACSM5Q6NUN0 579 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SHFQ7M4L6 423 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC46A3Q7Z3Q1 461 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 KIF18BQ86Y91 864 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PLA2G12AQ9BZM1 189 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CMC2Q9NRP2 79 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SCOCQ9UIL1 159 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 POU2F3Q9UKI9 436 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 MOKQ9UQ07 419 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 RCE1Q9Y256 329 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 HRH3Q9Y5N1 445 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 TVP23AA6NH52 213 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 M0R129 80 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 WNT11O96014 354 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CRHP06850 196 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 HSMCR30P0CW71 290 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF26P17031 533 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CEACAM16Q2WEN9 425 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC36A2Q495M3 483 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 KCTD18Q6PI47 426 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 THSD4Q6ZMP0 1018 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 SPATC1Q76KD6 591 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 NOXO1Q8NFA2 376 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 HRASLS5Q96KN8 279 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CNN2Q99439 309 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PTDSS2Q9BVG9 487 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PIEZO2Q9H5I5 2752 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CACNA1AO00555 2505 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 IQCMA0A1B0GVH7 501 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 C12orf71A8MTZ7 269 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 E9PLN8 166 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 LRRTM2O43300 516 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 KRT8P05787 483 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 LTBQ06643 244 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 PLXDC2Q6UX71 529 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR6K3Q8NGY3 331 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 RADILQ96JH8 1075 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF385AQ96PM9 386 aaKnown RBP9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 INTS14Q96SY0 518 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 VKORC1Q9BQB6 163 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 MED18Q9BUE0 208 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF426Q9BUY5 554 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
TNFAIP3-201ENST00000237289 CD8B2A6NJW9 211 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 TGM6O95932 706 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 STSP08842 583 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 SELENOPP49908 381 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 IGFBP7Q16270 282 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 GGNQ86UU5 652 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 NRG4Q8WWG1 115 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 RNFT2Q96EX2 444 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 SFXN3Q9BWM7 321 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 NUAK2Q9H093 628 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 FN3KQ9H479 309 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 MED20Q9H944 212 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 GP6Q9HCN6 339 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 TAS2R5Q9NYW4 299 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms