RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 UBALD2Q8IYN6 164 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 NUBPLQ8TB37 319 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 AKAP1Q92667 903 aaKnown RBP eCLIP14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ORAI1Q96D31 301 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 SCMH1Q96GD3 660 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ZFP3Q96NJ6 502 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 DUSP23Q9BVJ7 150 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 ING3Q9NXR8 418 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 USP34Q70CQ2 3546 aa14.61□□□□□ -0.07
UBE3D-201ENST00000237186 COL5A1P20908 1838 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-201ENST00000237186 NUP210LQ5VU65 1888 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 PLPP3O14495 311 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 SCO2O43819 266 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 GMFGO60234 142 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF254O75437 659 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 DHFRP00374 187 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 C1QBP02746 253 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 RAB40ALP0C0E4 278 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 RCVRNP35243 200 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 MAGEB1P43366 347 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 DMWDQ09019 674 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 RASGEF1BQ0VAM2 473 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 KLF9Q13886 244 aaPredicted RBP14.6□□□□□ -0.07
UBE3D-201ENST00000237186 SLC22A10Q63ZE4 541 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 POMZP3Q6PJE2 187 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 TMPRSS9Q7Z410 1059 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 ANKRD37Q7Z713 158 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 EID2Q8N6I1 236 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 CEP76Q8TAP6 659 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 RAB40AQ8WXH6 277 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 ASB17Q8WXJ9 295 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 TMEM234Q8WY98 164 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 ST8SIA1Q92185 356 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 THRSPQ92748 146 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 SLC25A36Q96CQ1 311 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 DCBLD2Q96PD2 775 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 BEX2Q9BXY8 128 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 TCF7L1Q9HCS4 588 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 MRPL39Q9NYK5 338 aaKnown RBP14.6□□□□□ -0.07
UBE3D-201ENST00000237186 CLEC4AQ9UMR7 237 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 MRPS7Q9Y2R9 242 aaKnown RBP14.6□□□□□ -0.07
UBE3D-201ENST00000237186 SIT1Q9Y3P8 196 aa14.6□□□□□ -0.07
UBE3D-201ENST00000237186 IGLV1-36A0A0B4J1U3 117 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 FTCDNL1E5RQL4 147 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 AGRPO00253 132 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 NAGAP17050 411 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 MNDAP41218 407 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 CCR9P51686 369 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SCAND1P57086 179 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 FAPQ12884 760 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 NKAIN1Q4KMZ8 207 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 PWWP2BQ6NUJ5 590 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ESPNLQ6ZVH7 1005 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 LRRTM1Q86UE6 522 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF417Q8TAU3 575 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 THEM6Q8WUY1 208 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 RNF138Q8WVD3 245 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 NSMAFQ92636 917 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SLC25A38Q96DW6 304 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 COMMD4Q9H0A8 199 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SLC25A18Q9H1K4 315 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 GHITMQ9H3K2 345 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 PAQR5Q9NXK6 330 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 IKZF2Q9UKS7 526 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ETV7Q9Y603 341 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 A0A087WV48 116 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 A0A0A6YYJ9 748 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 TRABD2BA6NFA1 517 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ANKUB1A6NFN9 424 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 C11orf98E9PRG8 122 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 AHSA1O95433 338 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 TCRBP04435 133 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ADRA2CP18825 462 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 CFPP27918 469 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 EPHA8P29322 1005 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SUMO3P55854 103 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 INSM1Q01101 510 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ROM1Q03395 351 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 C17orf67Q0P5P2 114 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ZP4Q12836 540 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 COL28A1Q2UY09 1125 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 HES5Q5TA89 166 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 FCRLAQ7L513 359 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 CDH24Q86UP0 819 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 PRSS35Q8N3Z0 413 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF433Q8N7K0 673 aaPredicted RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ASCC1Q8N9N2 400 aaKnown RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SLC38A9Q8NBW4 561 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 GPR148Q8TDV2 347 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 MCHR2Q969V1 340 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 C4orf45Q96LM5 186 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 OR8B4Q96RC9 309 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 GTPBP2Q9BX10 602 aaKnown RBP14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SLA2Q9H6Q3 261 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 LIN7BQ9HAP6 207 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 GALNT9Q9HCQ5 603 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 MCUBQ9NWR8 336 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 SLCO1C1Q9NYB5 712 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 AKAP7Q9P0M2 348 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms