RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TRAM1Q15629 374 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 MOB3CQ70IA8 216 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 DPPA2Q7Z7J5 298 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 EPHX3Q9H6B9 360 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 DUXAA6NLW8 204 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 GABARAPH6UMI1 98 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 OR8G3PP0DMU2 310 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 DAOP14920 347 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 GALP22466 123 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 CHAF1BQ13112 559 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 MLF2Q15773 248 aaPredicted RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ARMC10Q8N2F6 343 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 OR2L5Q8NG80 312 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 FAM83CQ9BQN1 747 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ZMAT3Q9HA38 289 aaKnown RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 NOP16Q9Y3C1 178 aaKnown RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 V9GY05 133 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF888P0CJ79 500 aaPredicted RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 GTF2F2P13984 249 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 PON3Q15166 354 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 AMZ1Q400G9 498 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 FAM76BQ5HYJ3 339 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM64Q6YI46 380 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ZAR1Q86SH2 424 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ASPGQ86U10 573 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 INO80EQ8NBZ0 244 aaPredicted RBP12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 OR51S1Q8NGJ8 323 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 ZPLD1Q8TCW7 415 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 TMED6Q8WW62 240 aa12.94□□□□□ -0.34
PCDHB3-201ENST00000231130 CXorf65A6NEN9 183 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 SNRPGP15A8MWD9 76 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 PRKNO60260 465 aaPredicted RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 RBBP9O75884 186 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 IFNGP01579 166 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF44P15621 663 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 S100A2P29034 98 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 GABRA3P34903 492 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 FAUP35544 74 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 RIDAP52758 137 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 PSMD4P55036 377 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 ECH1Q13011 328 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 AIMP2Q13155 320 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 MLC1Q15049 377 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 OLFML2AQ68BL7 652 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 KRT77Q7Z794 578 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 OR8D1Q8WZ84 308 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 SLAMF9Q96A28 289 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 SUCNR1Q9BXA5 334 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 PCBD2Q9H0N5 130 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM27Q9HBJ8 222 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM74BQ9NUR3 256 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 EPHA6Q9UF33 1036 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 OR5V1Q9UGF6 321 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 KCNE5Q9UJ90 142 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 GPR34Q9UPC5 381 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 hCG_1809904A0A1W2PP81 198 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A1W2PR64 198 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A1W2PRV1 198 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM82A0PJX8 343 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 ITGA10O75578 1167 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 VIPR2P41587 438 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 RPS11P62280 158 aaKnown RBP eCLIP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 CRIPAKQ8N1N5 446 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 RASD2Q96D21 266 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 MBNL1Q9NR56 388 aaKnown RBP12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 SMCO4Q9NRQ5 59 aa12.93□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A0A6YYC8 382 aaPredicted RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A0D9SG52 128 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 GXYLT2A0PJZ3 443 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 OR5H14A6NHG9 310 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 A6NLC8 198 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 BLOC1S5-TXNDC5H3BN57 136 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 I3L1I5 382 aaPredicted RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 NDUFB6O95139 128 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 ZFPL1O95159 310 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 NR2C1P13056 603 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 AGTR1P30556 359 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 RAB28P51157 221 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 CDK3Q00526 305 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 DHCR24Q15392 516 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 PLPP4Q5VZY2 271 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 METRNLQ641Q3 311 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 SFXN5Q8TD22 340 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms