RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 FRG2CA6NGY1 282 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 LRRN3E7EW58 273 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 J3QLW9 94 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 ACSM4P0C7M7 580 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF19P17023 458 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 CTRB1P17538 263 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 CXCR1P25024 350 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 GXYLT1Q4G148 440 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 CTRB2Q6GPI1 263 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR2Y1Q8NGV0 311 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF671Q8TAW3 534 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 CT55Q8WUE5 264 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF559Q9BR84 538 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 HEXA-AS1Q9H8Q6 139 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TNFRSF10DQ9UBN6 386 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TESQ9UGI8 421 aaKnown RBP10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 E9PI62 339 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 GPR171O14626 319 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 IGKV3-11P04433 115 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 H2AFB2P0C5Z0 115 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 ITGA3P26006 1051 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 NUP62P37198 522 aaPredicted RBP10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 BLVRAP53004 296 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 UBE2MP61081 183 aaKnown RBP10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 EEF1A1P68104 462 aaKnown RBP10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TPBGQ13641 420 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 OCLNQ16625 522 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 FAM122CQ6P4D5 195 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TIPARPQ7Z3E1 657 aaKnown RBP10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 OAFQ86UD1 273 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR6M1Q8NGM8 313 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 IFT27Q9BW83 186 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TMEM185BQ9H7F4 350 aa10.64□□□□□ -0.71
TNFAIP1-201ENST00000226225 TRAV27A0A087WT01 109 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SIX6O95475 246 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 AHCYP23526 432 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 RPL35P42766 123 aaKnown RBP10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 PUDPQ08623 228 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 MOSPD2Q8NHP6 518 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SLC22A8Q8TCC7 542 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SMPDL3BQ92485 455 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 KIAA1143Q96AT1 154 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TGIF2Q9GZN2 237 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF69Q9UC07 566 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TCFL5Q9UL49 500 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 MRPS18BQ9Y676 258 aaKnown RBP10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 B4E171 279 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TRIM77I1YAP6 450 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 FZD7O75084 574 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TRIM3O75382 744 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR5F1O95221 314 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 IL33O95760 270 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 UCHL1P09936 223 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 HTR2AP28223 471 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TSPAN7P41732 249 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 VEGFCP49767 419 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 HCCSP53701 268 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 RAB40BQ12829 278 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SNTB2Q13425 540 aaKnown RBP10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 MELKQ14680 651 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 GPR139Q6DWJ6 353 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 APOOLQ6UXV4 268 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 LINGO2Q7L985 606 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 CYB561A3Q8NBI2 242 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR51L1Q8NGJ5 315 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SFXN2Q96NB2 322 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 AIFM2Q9BRQ8 373 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 SLC35A3Q9Y2D2 325 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 ITGA10O75578 1167 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 DEFA5Q01523 94 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 PLA1AQ53H76 456 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 KIRREL2Q6UWL6 708 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 BPIFA2Q96DR5 249 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 ARHGDIGQ99819 225 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 C12orf10Q9HB07 376 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 POLE3Q9NRF9 147 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 MED11Q9P086 117 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 PPP4R1LQ9P1A2 415 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 FBXL2Q9UKC9 423 aa10.63□□□□□ -0.71
TNFAIP1-201ENST00000226225 PRRC2CQ9Y520 2896 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 RPS10-NUDT3A0A1W2PQS6 291 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 GP1BBP13224 206 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 TMEM201Q5SNT2 666 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF433Q8N7K0 673 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 TMEM99Q8N816 258 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 APCDD1LQ8NCL9 501 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 GNPDA2Q8TDQ7 276 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 SAMD8Q96LT4 415 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 KCNJ15Q99712 375 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 FUZQ9BT04 418 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 GSX2Q9BZM3 304 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 PPA2Q9H2U2 334 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 CCDC86Q9H6F5 360 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 SDHAF2Q9NX18 166 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 DNAJB12Q9NXW2 375 aaKnown RBP10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 MYOTQ9UBF9 498 aa10.62□□□□□ -0.71
TNFAIP1-201ENST00000226225 KCND3Q9UK17 655 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms