RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HRNRQ86YZ3 2850 aaPredicted RBP12.63□□□□□ -0.39
SUPT4H1-201ENST00000225504 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
SUPT4H1-201ENST00000225504 APCP25054 2843 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ABCA12Q86UK0 2595 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 A0A1W2PPR1 153 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 GNGT2O14610 69 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 CIB2O75838 187 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 SEC14L2O76054 403 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 NDUFB2O95178 105 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 IGFBP1P08833 259 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 QDPRP09417 244 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 PRKACGP22612 351 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 FPR3P25089 353 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 SSTR2P30874 369 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ACVR1BP36896 505 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 DAP3P51398 398 aaKnown RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 PRPS1P60891 318 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 TSPAN31Q12999 210 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 KPNB1Q14974 876 aaKnown RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 HIST3H3Q16695 136 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 TIMM23BQ5SRD1 257 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 AQP11Q8NBQ7 271 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ZNF519Q8TB69 540 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 HTRA1Q92743 480 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 Q96M85 177 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ULBP2Q9BZM5 246 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 NELFAQ9H3P2 528 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 SLC17A5Q9NRA2 495 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 RASSF1Q9NS23 344 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 ZNF226Q9NYT6 803 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 MAGED1Q9Y5V3 778 aaPredicted RBP12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 SLC25A15Q9Y619 301 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 TACC2O95359 2948 aa12.62□□□□□ -0.39
SUPT4H1-201ENST00000225504 IGKV1D-43A0A0B4J1Z2 117 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 IGHMP01871 453 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 HRGP04196 525 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 CD14P08571 375 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 IFNGR2P38484 337 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 TUBA1BP68363 451 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 TUBA4AP68366 448 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 TGFBR3Q03167 851 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 PPA1Q15181 289 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 RFX4Q33E94 735 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 SMARCD3Q6STE5 483 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 TUBA1AQ71U36 451 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 FAM122BQ7Z309 247 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 ARIH2OSQ8N7S6 290 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 GTPBP3Q969Y2 492 aaKnown RBP12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 DUS3LQ96G46 650 aaKnown RBP12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 SAMD8Q96LT4 415 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 FEVQ99581 238 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 POLDIP3Q9BY77 421 aaKnown RBP12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 EGLN3Q9H6Z9 239 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 KRCC1Q9NPI7 259 aaPredicted RBP12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 NRIP3Q9NQ35 241 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 AP4S1Q9Y587 144 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 IER3IP1Q9Y5U9 82 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 ABCA4P78363 2273 aa12.61□□□□□ -0.39
SUPT4H1-201ENST00000225504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 DPRXA6NFQ7 191 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 NPIPB13A6NJU9 1138 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 NPIPB4C9JG80 1138 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 H7C1C5 153 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 IMPA2O14732 288 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 IGHG1P01857 330 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 CLRN1P58418 232 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 ACTR3P61158 418 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 LCN6P62502 163 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 FMODQ06828 376 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 DBPQ10586 325 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 YTHDF3Q7Z739 585 aaKnown RBP12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 AMIGO2Q86SJ2 522 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 P2RY8Q86VZ1 359 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 C1orf162Q8NEQ5 155 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 GIPC3Q8TF64 312 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 NRGNQ92686 78 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 RASD2Q96D21 266 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 PLPPR2Q96GM1 343 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 OR52D1Q9H346 318 aa12.6□□□□□ -0.39
SUPT4H1-201ENST00000225504 YY1AP1Q9H869 796 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms