RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RNF4P78317 190 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 CCL7P80098 99 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 LTBQ06643 244 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 PON3Q15166 354 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF141Q15928 474 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 KLHL26Q53HC5 615 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 OGFOD3Q6PK18 319 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF433Q8N7K0 673 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF721Q8TF20 911 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SLC25A18Q9H1K4 315 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF768Q9H5H4 540 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 CHMP1AQ9HD42 196 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 TRIM36Q9NQ86 728 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 NUFIP1Q9UHK0 495 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 IRGMA1A4Y4 181 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 PMS2P1A4D2B8 440 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 NUDT21O43809 227 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 MT-ND5P03915 603 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 KLK3P07288 261 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 NR2C1P13056 603 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SOX2P48431 317 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 GPR143P51810 404 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 FBXW4P57775 412 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 DEFA1P59665 94 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 DEFA3P59666 94 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF273Q14593 569 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 INPP5JQ15735 1006 aaPredicted RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 HYAL4Q2M3T9 481 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 ZNF181Q2M3W8 571 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SLC25A35Q3KQZ1 300 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 C17orf107Q6ZR85 190 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 IZUMO1Q8IYV9 350 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 OR5M1Q8NGP8 315 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 RNF32Q9H0A6 362 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 B3GAT2Q9NPZ5 323 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 SLC23A1Q9UHI7 598 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 EXOGQ9Y2C4 368 aaKnown RBP9.05□□□□□ -0.96
USP11-201ENST00000218348 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
USP11-201ENST00000218348 FREM3P0C091 2139 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 ACOD1A6NK06 481 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 FMO6PO60774 539 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 IL1AP01583 271 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 IGHA1P01876 353 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 OR8G3PP0DMU2 310 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 CXCR1P25024 350 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 EDNRAP25101 427 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 ALG10Q5BKT4 473 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 PWWP2BQ6NUJ5 590 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 RDH10Q8IZV5 341 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 UBASH3BQ8TF42 649 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 TAAR8Q969N4 342 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 PRRX2Q99811 253 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 SLC22A11Q9NSA0 550 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 RXFP3Q9NSD7 469 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 MED17Q9NVC6 651 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 MRPS18AQ9NVS2 196 aaKnown RBP9.04□□□□□ -0.96
USP11-201ENST00000218348 IKZF2Q9UKS7 526 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 AK6Q9Y3D8 172 aaKnown RBP9.04□□□□□ -0.96
USP11-201ENST00000218348 RALGAPA1Q6GYQ0 2036 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 A0A1W2PQM1 296 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 TMEM72A0PK05 275 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 ALOX12BO75342 701 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 ABCD3P28288 659 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 PPICP45877 212 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 CLDN12P56749 244 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 RAB14P61106 215 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 GABREP78334 506 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 IGLV3-21P80748 117 aaPredicted RBP9.04□□□□□ -0.96
USP11-201ENST00000218348 EGR4Q05215 589 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 LGALS3BPQ08380 585 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 SKP2Q13309 424 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 EBPQ15125 230 aaKnown RBP9.04□□□□□ -0.96
USP11-201ENST00000218348 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 LCN10Q6JVE6 187 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 CLEC2AQ6UVW9 174 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 SLC29A4Q7RTT9 530 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 SAMD12Q8N8I0 201 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 OR14A2Q96R54 314 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 LPAR4Q99677 370 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 SYT4Q9H2B2 425 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 ZCCHC4Q9H5U6 513 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 RASD1Q9Y272 281 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
USP11-201ENST00000218348 TRBV2A0A0J9YWF9 115 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 A0A1B0GX78 115 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 LNP1A1A4G5 178 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 H3BML4 177 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 RRP8O43159 456 aaKnown RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 F8A1P23610 371 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 CLDN6P56747 220 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 HLA-BQ31612 363 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 HES5Q5TA89 166 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 ZNF57Q68EA5 555 aaPredicted RBP9.03□□□□□ -0.96
USP11-201ENST00000218348 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
USP11-201ENST00000218348 GDPGP1Q6ZNW5 385 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms