RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 GPR78Q96P69 363 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 OR51I2Q9H344 312 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 PIRO00625 290 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ARPC3O15145 178 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF133P52736 654 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 CLDN17P56750 224 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ERVFC1-1P60608 527 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 FAM122BQ7Z309 247 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 BATF2Q8N1L9 274 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ADAMTS16Q8TE57 1224 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 C1orf74Q96LT6 269 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 CABLES2Q9BTV7 478 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 MRPS14O60783 128 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 AREGP15514 252 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ERV3-1Q14264 604 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 SPACA1Q9HBV2 294 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 RNF150Q9ULK6 438 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 LRRC3CA6NJW4 275 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 PIAS2O75928 621 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ACP2P11117 423 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 HOXC5Q00444 222 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 L3MBTL4Q8NA19 623 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 PTPRMP28827 1452 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ACOD1A6NK06 481 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 GABRB3P28472 473 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 SIRPAP78324 504 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 DSC1Q08554 894 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 EXOSC7Q15024 291 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ADPRMQ3LIE5 342 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 LIPIQ6XZB0 460 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF620Q6ZNG0 422 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 COMMD1Q8N668 190 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 MRIQ9BWK5 157 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 CLEC12BQ2HXU8 276 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 MRPS28Q9Y2Q9 187 aaKnown RBP13.57□□□□□ -0.24
SPTLC2-201ENST00000216484 ABHD16AO95870 558 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 CCR6P51684 374 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 OR10A3P58181 314 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 LCTLQ6UWM7 567 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 KIRREL1Q96J84 757 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 ST6GALNAC4Q9H4F1 302 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RNASET2O00584 256 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 KIAA1024LP59773 190 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 EVX2Q03828 476 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 LETMD1Q6P1Q0 360 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 MENTQ9BUN1 341 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SUSD2Q9UGT4 822 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 TRAV20A0A0B4J274 112 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SPI1P17947 270 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 GDNFP39905 211 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RPUSD4Q96CM3 377 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SORBS1Q9BX66 1292 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 PGBD5Q8N414 524 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 CLSTN3Q9BQT9 956 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 TEX50A0A1B0GTY4 177 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RFPL4AA6NLU0 287 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RFPL4AL1F8VTS6 287 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 TYROBPO43914 113 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF93P35789 620 aaPredicted RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 RHBDD1Q8TEB9 315 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SFXN1Q9H9B4 322 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 WNT7BP56706 349 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 PIGMQ9H3S5 423 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 TAS2R5Q9NYW4 299 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
SPTLC2-201ENST00000216484 M0QYG6 137 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TAS2R45P59539 299 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ERHP84090 104 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 NHLH1Q02575 133 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 NHLH2Q02577 135 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ZP2Q05996 745 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 DOC2BQ14184 412 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 DGAT2L6Q6ZPD8 337 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 FA2HQ7L5A8 372 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 DTWD1Q8N5C7 304 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 IFI44Q8TCB0 444 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ANKRD60Q9BZ19 345 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms