RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 EMC6Q9BV81 110 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 ZNF436Q9C0F3 470 aaPredicted RBP13.71□□□□□ -0.21
EFNB1-201ENST00000204961 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.21
EFNB1-201ENST00000204961 ZNF281Q9Y2X9 895 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 GPR89AB7ZAQ6 455 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SCDO00767 359 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SHOXO15266 292 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 PEX14O75381 377 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 GPR89BP0CG08 455 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SLC35E2P0CK97 266 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SMIM10L1P0DMW3 83 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 PRKACAP17612 351 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 P2RX1P51575 399 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 MAP2K6P52564 334 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 TAS2R43P59537 309 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 CHST4Q8NCG5 386 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 ST8SIA2Q92186 375 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SMIM10Q96HG1 83 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 CMKLR1Q99788 373 aa13.71□□□□□ -0.21
EFNB1-201ENST00000204961 SVILO95425 2214 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 IGHV5-51A0A0C4DH38 117 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 LMX1BO60663 402 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF35P13682 527 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ACTC1P68032 377 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ACTA1P68133 377 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 PITPNAQ00169 270 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 FAM199XQ6PEV8 388 aaPredicted RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 TMEM184AQ6ZMB5 413 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 NT5CQ8TCD5 201 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 CMBLQ96DG6 245 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 CXorf58Q96LI9 332 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 NPAS1Q99742 590 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 SLITRK2Q9H156 845 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ANKRD10Q9NXR5 420 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 FOXS1O43638 330 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ICOSLGO75144 302 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 NKX2-2O95096 273 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 SERPINA3P01011 423 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 SLC2A1P11166 492 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF28P17035 718 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 IL11P20809 199 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 CXCR1P25024 350 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 AKR1C2P52895 323 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ART1P52961 327 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 AKR1C1Q04828 323 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 OR4S1Q8NGB4 309 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 CASTOR1Q8WTX7 329 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 TAAR8Q969N4 342 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 ZC3HAV1LQ96H79 300 aaKnown RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 DIABLOQ9NR28 239 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 S1PR1P21453 382 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 RAB38P57729 211 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 FMODQ06828 376 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 CEBPEQ15744 281 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 TPRA1Q86W33 373 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 RANBP3Q9H6Z4 567 aaPredicted RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
EFNB1-201ENST00000204961 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
EFNB1-201ENST00000204961 OR5K3A6NET4 321 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 XKRYO14609 159 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 SEC14L5O43304 696 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 ITGA10O75578 1167 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 CFL1P23528 166 aaKnown RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 GNALP38405 381 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 FBXW4P57775 412 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 TAS2R20P59543 309 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 PXKQ7Z7A4 578 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 ACBD4Q8NC06 268 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 VSTM2LQ96N03 204 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 EXO5Q9H790 373 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 C14orf105Q9NVL8 296 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF230Q9UIE0 474 aaPredicted RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 CAMK2AQ9UQM7 478 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 ASPMQ8IZT6 3477 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 SLC25A12O75746 678 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 CD3DP04234 171 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 GLULP15104 373 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 M6PRP20645 277 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 HSF2Q03933 536 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 OPCMLQ14982 345 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 STK11Q15831 433 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 DCAF12L2Q5VW00 463 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 HLA-DQA1Q5Y7H0 255 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
EFNB1-201ENST00000204961 TICRRQ7Z2Z1 1910 aa13.69□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF550Q7Z398 422 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms