RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Lemd1Q14C37 129 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Pla2g7Q60963 440 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Prm3Q62100 101 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Nabp1Q8BGW5 198 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ap3s2Q8BSZ2 193 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Timmdc1Q8BUY5 285 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 SrrdQ8K2M3 249 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Vmn1r228Q8R2A7 333 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr970Q8VFN3 311 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Papd4Q91YI6 484 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Fam69bQ99ML4 431 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Q9CRW3 126 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 BambiQ9D0L6 260 aa11.84□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gm3854A0A1B0GSS6 495 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Wscd2D4PHA7 571 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r34E9PVI0 852 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fbxw28E9Q8A4 466 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r37F8VQD3 802 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm21797J3QNW5 180 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r45L7N2B5 852 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r29L7N2D4 852 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tbx6P70327 436 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Hoxc4Q08624 264 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fbxw16Q497Z0 464 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Slc38a8Q5HZH7 432 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Npepl1Q6NSR8 524 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 PcnpQ6P8I4 178 aaKnown RBP11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Zfp157Q6PCM4 567 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Otop1Q80VM9 600 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prps1l1Q8C5R8 318 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Amdhd2Q8JZV7 409 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cd177Q8R2S8 817 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Duoxa1Q8VE49 341 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr518Q8VEW1 333 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1048Q8VGS2 320 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr558Q8VGZ7 317 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Asb15Q8VHS6 583 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 HypmQ9CR04 117 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Efcab11Q9D0E5 162 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr27Q9EQ90 311 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 SpastQ9QYY8 614 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 CalcrlQ9R1W5 463 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 CorinQ9Z319 1113 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 9930021J03RikH3BKP8 2027 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm13762A2ATG2 311 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tomm5B1AXP6 51 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 4933403O08RikF6UK53 379 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Oosp3G5E8D7 195 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1221L7MU53 311 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Emc8O70378 207 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fgf3P05524 245 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Klk1P15947 261 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 PlgP20918 812 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Six5P70178 719 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 2410002F23RikQ3TE80 284 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Zfp791Q497V9 528 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr146Q60884 306 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prss34Q80UR4 318 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mmp28Q8CGV8 520 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fbxo45Q8K3B1 286 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr229Q8VFN5 307 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 BniplQ99JU7 328 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ceacam20Q9D2Z1 577 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dapl1Q9D757 107 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Slc48a1Q9D8M3 146 aa11.83□□□□□ -0.52
Nup88-203ENSMUST00000108531 Igkv17-127A0A0G2JDN5 117 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1338A2ACY7 313 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1095A3KPP7 308 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ttll3A4Q9E5 927 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn2r99H3BK37 856 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 2410141K09RikK7N769 464 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Kcns1O35173 497 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lin7bO88951 207 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 GcatO88986 416 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Col4a2P08122 1707 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fcgr3P08508 261 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tspan5P62080 268 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fam71f1Q3UZD7 341 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Grhl3Q5FWH3 603 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Zp3rQ60736 579 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Klf2Q60843 354 aaKnown RBP11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tha1Q6XPS7 400 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 P4htmQ8BG58 503 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mospd3Q8BGG6 235 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Serinc5Q8BHJ6 461 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lrp11Q8CB67 483 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 RybpQ8CCI5 228 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rab43Q8CG50 210 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Vmn1r42Q8VBS7 329 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Abhd14bQ8VCR7 210 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr998Q8VF76 314 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1487Q8VFQ6 315 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mrpl15Q9CPR5 295 aaKnown RBP11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tmem218Q9CQ44 115 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 TpbpbQ9CQC0 121 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tomm34Q9CYG7 309 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dusp12Q9D0T2 339 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ptp4a3Q9D658 173 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Slc9a3r2Q9JHL1 337 aa11.82□□□□□ -0.52
Nup88-203ENSMUST00000108531 Klhl1Q9JI74 751 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms