RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Samt4Q9D4X6 233 aa13.03□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Gfra4Q9JJT2 260 aa13.03□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr71Q9QZ18 312 aa13.03□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Sipa1l2Q80TE4 1722 aa13.03□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Gm34653A0A1L1SR01 368 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr1247A2AT78 314 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Gm1330D3Z460 184 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Gm17067E9Q6S4 354 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Fbxw28E9Q8A4 466 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Otx2P80206 289 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Smpd1Q04519 627 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Cypt4Q6P925 153 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Mfsd9Q8C0T7 466 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Il17rcQ8K4C2 698 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 NotumQ8R116 503 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Mboat2Q8R3I2 519 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr410Q8VFX7 315 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr402Q8VFX8 315 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr272Q8VGA0 319 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Ubox5Q925F4 539 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Fut2Q9JL27 347 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Hnf4gQ9WUU6 408 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Zfp825A0A1Y7VK00 292 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Gm10375L7N286 184 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Rce1P57791 329 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 MthfsdQ3URQ7 372 aaKnown RBP13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Pgap1Q3UUQ7 922 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Enpp3Q6DYE8 874 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr1148Q7TR35 314 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Adamtsl2Q7TSK7 957 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Slc22a20Q80UJ1 556 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Actbl2Q8BFZ3 376 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Wdr92Q8BGF3 357 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 QpctlQ8BH73 383 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Adam4Q8CGQ2 763 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Olfr291Q8VF60 317 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Fam174aQ9D3L0 190 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Tmem239Q9DA47 151 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Tp73Q9JJP2 631 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Six6Q9QZ28 246 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Sema6cQ9WTM3 931 aa13.02□□□□□ -0.32
Col3a1-201ENSMUST00000087883 Chd2E9PZM4 1827 aaKnown RBP13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Pm20d2A3KG59 431 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gm3543D3Z235 184 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr243E9PV96 316 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr628K7N6B2 316 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr117L7N1Z1 317 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 P06321 130 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Ifna9P09235 190 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Taar8cQ5QD05 344 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Kcnc3Q63959 769 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cdkl1Q8CEQ0 352 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Agfg1Q8K2K6 561 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr130Q8VFC1 317 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Rab30Q923S9 203 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 1700029P11RikQ9CQ68 150 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cldn8Q9Z260 225 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Atrnl1Q6A051 1378 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Myh2G3UW82 1942 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr1555-ps1A0A140LHT7 321 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Vmn1r176G3UW31 304 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Fbxw15L7N1X6 466 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Emc8O70378 207 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Tcn2O88968 430 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cuzd1P70412 606 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gpr55Q3UJF0 327 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Fam57bQ7TNV1 275 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gstm7Q80W21 218 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Slc22a29Q8BWG6 551 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gykl1Q8C635 549 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr1254Q8VFB1 314 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Slc39a8Q91W10 462 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Bbc3Q99ML1 193 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Magt1Q9CQY5 335 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Ighv16-1A0A0A6YW39 117 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Wfdc16A2A5H4 111 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Ppp1r3dA2AJW4 279 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr1095A3KPP7 308 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 9130204L05RikG3UWB8 92 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gm21738J3QP72 227 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Ap1g1P22892 822 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 MeikinQ5F2C3 434 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 McatQ8R3F5 381 aaKnown RBP13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr167Q8VGJ5 312 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Mrm1Q99J25 320 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Dhrs1Q99L04 313 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Gpr88Q9EPB7 384 aa13.02□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cul9Q80TT8 1865 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Nkx6-2D3Z4R4 277 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Vmn2r66K7N6R9 851 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cdh26P59862 763 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Cpne4Q8BLR2 557 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Ankrd33Q8BXP5 385 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Mtnr1bQ8CIQ6 364 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Vmn1r32Q8R2D9 302 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Dusp15Q8R4V2 235 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Mitd1Q8VDV8 249 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Olfr734Q8VFT4 313 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 Vmn2r113E9PZA6 856 aa13.01□□□□□ -0.33
Col3a1-201ENSMUST00000087883 GdnfP48540 211 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms