RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm11361A0A1Y7VKY1 152 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm10260F6YVP7 152 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rps18P62270 152 aaKnown RBP15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 CycsP62897 105 aaKnown RBP15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tmem253Q3UNB8 204 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Sema6dQ76KF0 1073 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tas2r113Q7M711 309 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fbxo45Q8K3B1 286 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hyal3Q8VEI3 412 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr434Q8VF17 321 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr47Q8VF18 321 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 P2ry14Q9ESG6 338 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r10W4VSP8 311 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Lao1B1ARV3 523 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 GzmfP08883 248 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 NfkbidQ2TB02 327 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Crtac1Q8R555 646 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Lcn8Q924P3 175 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 PhyhO35386 338 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tcn2O88968 430 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr736Q8VFT6 312 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc31a2Q9CPU9 143 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr655E9Q252 308 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn2r109K7N747 858 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 MbpP04370 250 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zic5Q7TQ40 622 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr368Q8VF22 327 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Plekhf2Q91WB4 249 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ceacam2Q925P2 520 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1410E9PYK6 323 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hist1h1cP15864 212 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1252Q7TQZ2 314 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1312Q8VF10 317 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rnf225Q9D7D1 332 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hs3st4D3YVV6 449 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm4969D3YZT1 566 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn2r99H3BK37 856 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Six1Q62231 284 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Camk2aP11798 478 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zp1Q62005 623 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 B430306N03RikQ6QX36 289 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp273Q7M6W8 501 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp85Q7TMC9 473 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 P2ry12Q9CPV9 347 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cmtm8Q9CZR4 173 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 ArafP04627 604 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cds1P98191 461 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Elmod2Q8BGF6 293 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ddx1Q91VR5 740 aaKnown RBP15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Papd4Q91YI6 484 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Dusp3Q9D7X3 185 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cldnd2Q9D9H2 167 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cx3cr1Q9Z0D9 354 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1034A0A1L1ST14 310 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fcer1aP20489 250 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 IqcjQ8BPW0 110 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Lrfn5Q8BXA0 719 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc35a3Q8R1T4 326 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Nkx6-1Q99MA9 365 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 MNCb-2990Q9JJ93 142 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Frmpd3A0A140LIW3 1774 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Kiaa1324A2AFS3 1009 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 TpppQ7TQD2 218 aaKnown RBP15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fbxw13Q8BI57 466 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Syt13Q9EQT6 426 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pmm2Q9Z2M7 242 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn2r113E9PZA6 856 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r86L7N213 316 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Alg6Q3TAE8 507 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 EgflamQ4VBE4 1017 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hsf5Q5ND04 624 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Elavl2Q60899 360 aaKnown RBP15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 PigwQ8C398 503 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 RabepkQ8VCH5 380 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Eif3fQ9DCH4 361 aa15.48■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pcdh17E9PXF0 1157 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp995E9Q6M3 437 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 CfpP11680 464 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tpt1P63028 172 aaKnown RBP15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1290Q7TQX8 312 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm10600Q8BQ57 223 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1394Q8VET2 312 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pate3B3GLJ3 98 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mcpt2P15119 244 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tnfsf10P50592 291 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 MthfsdQ3URQ7 372 aaKnown RBP15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Dhrs1Q99L04 313 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rpusd4Q9CWX4 377 aaKnown RBP15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr663A0A1B0GSI9 319 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp169E9Q3R6 731 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Kcnj15O88932 375 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pou3f1P21952 449 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pou3f2P31360 445 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hepacam2Q4VAH7 463 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Grxcr1Q50H32 290 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fut10Q5F2L2 481 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1167Q7TR26 316 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tmbim1Q8BJZ3 309 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gk2Q9WU65 554 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm45716A0A1B0GRQ0 93 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms