RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ptp4a1Q63739 173 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ffar4Q7TMA4 361 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Chchd4Q8VEA4 139 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Magt1Q9CQY5 335 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sec13Q9D1M0 322 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Obp1aQ9D3H2 163 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sectm1bQ9JL59 212 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Lbx2Q9WUN8 195 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 1700025B11RikA0A087WNZ6 93 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm14418A2ARR6 358 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm14322A2AW66 358 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Morn1A2RTS7 477 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 5430401F13RikE9Q328 175 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Prl4a1O35256 227 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 SgceO70258 437 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Acp2P24638 423 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Rfx3P48381 749 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Zc3h12dQ8BIY3 533 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Eif1axQ8BMJ3 144 aaKnown RBP10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1495Q8VEZ4 319 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cops7aQ9CZ04 275 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Fam96bQ9D187 163 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Usp18Q9WTV6 368 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm15013V9GWY0 266 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm13124A2A752 406 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 PtprfA2A8L5 1898 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1338A2ACY7 313 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr68E9PYY2 315 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Vmn1r169L7N275 304 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 RradO88667 308 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ctf1Q60753 203 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Shc4Q6S5L9 626 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 H2-M2Q6W9L1 343 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc30a8Q8BGG0 367 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Esrp2Q8K0G8 717 aaKnown RBP10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Bbox1Q924Y0 387 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Eif3gQ9Z1D1 320 aaKnown RBP10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Arid2E9Q7E2 1828 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Btbd35f23A0A0R4J2B9 498 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr228A0A1L1SR98 313 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4933403O08RikF6UK53 379 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm9857F7CXR1 130 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Vmn2r69G3XA45 850 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 GipP48756 144 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 KcnrgQ2TUM3 264 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gcnt7Q3V3K7 433 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Serinc4Q5XK03 492 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Fzd7Q61090 572 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sema4cQ64151 834 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Casd1Q7TN73 797 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Rhox11Q810N8 206 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Zfand1Q8BFR6 268 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Wdr6Q99ME2 1125 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cyp2u1Q9CX98 530 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc22a5Q9Z0E8 557 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 CatsperdE9Q9F6 805 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Dsg2O55111 1122 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Wnt2bO70283 389 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Fgf3P05524 245 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Lrrc28Q3TX51 367 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Prtn3Q61096 254 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Clns1aQ61189 236 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Runx3Q64131 409 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Hs3st2Q673U1 367 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tram1l1Q8QZR0 363 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr952Q8VFD7 314 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr98Q8VFD9 309 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr935Q8VG16 308 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr160Q8VGE3 309 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr558Q8VGZ7 317 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Acy3Q91XE4 318 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr955Q9EQ97 314 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Padi1Q9Z185 662 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm13420A0A140LJJ2 248 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm21560D3Z7A4 205 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4930555G01RikL7N253 205 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Nipsnap1O55125 284 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Hdac3O88895 424 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gdi1P50396 447 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Pcdh19Q80TF3 1145 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gpr18Q8K1Z6 331 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr769Q8K501 312 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Oasl2Q9Z2F2 508 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Heatr5bQ8C547 2070 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sbf1Q6ZPE2 1867 aa10.45□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc23a4A0A0J9YUX7 615 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm17949A0A1B0GRV7 212 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Vmn2r29L7N2D4 852 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Pbx2O35984 430 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Galr2O88854 371 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Mapk14P47811 360 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Acta2P62737 377 aaKnown RBP10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Actg2P63268 376 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4933415F23RikQ14BX6 153 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Fam46cQ5SSF7 391 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 LpoQ5SW46 710 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Elavl3Q60900 367 aaKnown RBP10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Spin2cQ6NVE3 257 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gpr75Q6X632 540 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr198Q7TS40 306 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms