RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Slc22a30Q96LX3 552 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Rnps1Q99M28 305 aaKnown RBP10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Rtn4rQ99PI8 473 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Ceacam20Q9D2Z1 577 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Tmem176aQ9DCS1 244 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Atp5hQ9DCX2 161 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Zbtb32Q9JKD9 465 aa10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Sptan1P16546 2472 aaKnown RBP10.09□□□□□ -0.79
Ccdc28b-201ENSMUST00000030586 Gm20219A0A1B0GRQ3 87 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 A0A1W2P799 418 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Gm11565A2A4M7 156 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Susd1E9Q3H4 752 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Gm10799F7C7U2 104 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Zfp616J3QN14 987 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Gtpbp1O08582 668 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Zmat3O54836 290 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Hcn3O88705 779 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Nfatc1O88942 717 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 F10O88947 481 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Igh-3P01867 404 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 AdaP03958 352 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 ApoeP08226 311 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Dpy19l2P0CW70 773 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 TpoP35419 914 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tnfsf10P50592 291 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Defa8P50706 81 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Nkx3-1P97436 237 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Prelid2Q0VBB0 177 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 A4gntQ14BT6 341 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Defb20Q30KP3 96 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Eif4e1bQ3UTA9 244 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Nutm2Q3V0C3 733 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 N4bp2l1Q3V2Q8 238 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Vezf1Q5SXC4 518 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Olfr145Q60882 310 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Foxg1Q60987 481 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Il18r1Q61098 537 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Klk1b21Q61759 261 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Zfp866Q6PGD2 520 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Klhl9Q6ZPT1 617 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Sult2a8Q8BGL3 282 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tbl1xr1Q8BHJ5 514 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Mtrf1lQ8BJU9 373 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ifi44Q8BV66 422 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Snapc1Q8K0S9 389 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ly6g5cQ8K1T5 149 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Vmn1r210Q8R274 306 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Vmn1r23Q8R2D0 302 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ttc36Q8VBW8 186 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Znf385aQ8VD12 386 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ptgr2Q8VDQ1 351 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Olfr800Q8VFH7 311 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Olfr668Q8VGW3 318 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Defb6Q91VD6 63 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Spryd4Q91WK1 207 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Myo7bQ99MZ6 2113 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ddx28Q9CWT6 540 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Mrps28Q9CY16 186 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Stx12Q9ER00 274 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 HgfacQ9R098 653 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 SonQ9QX47 2444 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 LystP97412 3788 aa10.08□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Cep250Q60952 2414 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Gm10358A0A1D5RLD8 333 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ppp1r3dA2AJW4 279 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Gm3543D3Z235 184 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Mettl7a3G3X9G9 244 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Vmn1r120K7N6J6 305 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 P06321 130 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 GapdhP16858 333 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Abcb1aP21447 1276 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Wt1P22561 449 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Sstr2P30875 369 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ccng1P51945 294 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Ctbp2P56546 445 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 SgcbP82349 320 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Lrrn4clQ3TYX2 239 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Slc25a33Q3TZX3 320 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Entpd6Q3U0P5 455 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tbrg1Q3UB74 406 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Fam20cQ5MJS3 579 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 WdcpQ6NV72 663 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Olfr1308Q7TQX0 320 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 IfneQ80ZF2 192 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Lair1Q8BG84 263 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 QpctlQ8BH73 383 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tmco6Q8BQX5 494 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Fbxo4Q8CHQ0 385 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Cdc42ep2Q8JZX9 214 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Vmn1r183Q8K3N5 305 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Slc25a28Q8R0Z5 364 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Akr1d1Q8VCX1 325 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Olfr1467Q8VFW1 308 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Dus3lQ91XI1 637 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Chid1Q922Q9 393 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Eif1bQ9CXU9 113 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Supt7lQ9CZV5 412 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 OxsmQ9D404 459 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Emc9Q9DB76 206 aa10.07□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Entpd4Q9DBT4 613 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms