RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	LRIF1	Q5T3J3	769 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	C1orf146	Q5VVC0	180 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	NIPAL1	Q6NVV3	410 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CCDC137	Q6PK04	289 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	LANCL3	Q6ZV70	420 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SH2D5	Q6ZV89	423 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	MOB3C	Q70IA8	216 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	MEPCE	Q7L2J0	689 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	ZNF550	Q7Z398	422 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	MDGA2	Q7Z553	956 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	LDB1	Q86U70	411 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SLC22A16	Q86VW1	577 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	LACC1	Q8IV20	430 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	ADGRF3	Q8IZF5	1079 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CLEC4F	Q8N1N0	589 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	FAM86B1	Q8N7N1	296 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SRFBP1	Q8NEF9	429 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	OR4K14	Q8NGD5	310 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	LHFPL5	Q8TAF8	219 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	M1AP	Q8TC57	530 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	LRRC20	Q8TCA0	184 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	NAT14	Q8WUY8	206 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	TANK	Q92844	425 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	OSTF1	Q92882	214 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	FAM136A	Q96C01	138 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	OMA1	Q96E52	524 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	MARK4	Q96L34	752 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SIGLEC11	Q96RL6	698 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CCT8L2	Q96SF2	557 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	FAM110A	Q9BQ89	295 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	H2AFJ	Q9BTM1	129 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	FICD	Q9BVA6	458 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	HDHD5	Q9BXW7	423 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	TTTY12	Q9BZ98	90 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SLC39A8	Q9C0K1	460 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CHRNA10	Q9GZZ6	450 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	RAB6C	Q9H0N0	254 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	TMEM185B	Q9H7F4	350 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CXorf36	Q9H7Y0	433 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	CALHM2	Q9HA72	323 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	PLGRKT	Q9HBL7	147 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	PNO1	Q9NRX1	252 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	DEPP	Q9NTK1	212 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	SPRR3	Q9UBC9	169 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	ENPP5	Q9UJA9	477 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	IKZF3	Q9UKT9	509 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	GPR132	Q9UNW8	380 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	RHBDD3	Q9Y3P4	386 aa		4.53	□□□□□ -1.68
CASC19-256	ENST00000641746	TRGV5	A0A0B4J1U4	118 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746		A0A0J9YY10	115 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746		A0A0J9YYE9	177 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746		A0A1W2PPV4	95 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	LOC390937	A0A1W2PQ73	354 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	FUOM	A2VDF0	154 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	TMEM210	A6NLX4	147 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ANKRD66	B4E2M5	251 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	USP17L23	D6RBM5	183 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ATP6V1G2-DDX39B	F2Z307	99 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746		H3BMM5	538 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	NR5A2	O00482	541 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	TJP3	O95049	919 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	TRBC1	P01850	177 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	IFNA16	P05015	189 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	SLC35G4	P0C7Q5	338 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	TNNI3	P19429	210 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ZNF10	P21506	573 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	MSR1	P21757	451 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	CASP1	P29466	404 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	PPIF	P30405	207 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	GRIA1	P42261	906 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	PRKAG1	P54619	331 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	AP1S2	P56377	157 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	HILS1	P60008	231 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	MAX	P61244	160 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ATP6V0D1	P61421	351 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	SLC10A7	Q0GE19	358 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	FAM189A2	Q15884	450 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	EXT1	Q16394	746 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ACSF3	Q4G176	576 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	LIN52	Q52LA3	116 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	CCNYL2	Q5T2Q4	361 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	HES5	Q5TA89	166 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	PXDC1	Q5TGL8	231 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	PLCXD3	Q63HM9	321 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	FAM90A2P	Q658T7	463 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	PRMT9	Q6P2P2	845 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	KCTD8	Q6ZWB6	473 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	EIF3M	Q7L2H7	374 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	LINC00523	Q86TU6	105 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	GPAT4	Q86UL3	456 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	GPR180	Q86V85	440 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	SLC26A11	Q86WA9	606 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	VRK2	Q86Y07	508 aa		4.52	□□□□□ -1.69
CASC19-256	ENST00000641746	ZDHHC23	Q8IYP9	409 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms