RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 FNDC9Q8TBE3 224 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 RNF128Q8TEB7 428 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 FAR1Q8WVX9 515 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 TXNDC15Q96J42 360 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 TUBA1CQ9BQE3 449 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 MED20Q9H944 212 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.68■□□□□ 0.42
PHGDH-210ENST00000641115 TPRKBQ9Y3C4 175 aa17.68■□□□□ 0.42
PHGDH-210ENST00000641115 MAGEA13PA6NCF6 341 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 XPNPEP2O43895 674 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 CDH11P55287 796 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 KCTD21Q4G0X4 260 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 CREB3L2Q70SY1 520 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 BBS1Q8NFJ9 593 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 ADAD1Q96M93 576 aaKnown RBP17.67■□□□□ 0.42
PHGDH-210ENST00000641115 SNX18Q96RF0 628 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 PLCXD1Q9NUJ7 323 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 KLHL9Q9P2J3 617 aa17.67■□□□□ 0.42
PHGDH-210ENST00000641115 RPL36Q9Y3U8 105 aaKnown RBP17.67■□□□□ 0.42
PHGDH-210ENST00000641115 ATMQ13315 3056 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 PRSS37A4D1T9 235 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 OR6C68A6NDL8 312 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF726A6NNF4 738 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF716A6NP11 495 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 H7C1C5 153 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 AKAP8O43823 692 aaKnown RBP17.66■□□□□ 0.42
PHGDH-210ENST00000641115 FCGR2AP12318 317 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 EEF1B2P24534 225 aaKnown RBP17.66■□□□□ 0.42
PHGDH-210ENST00000641115 SLC16A1P53985 500 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 CLDN17P56750 224 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 LCN6P62502 163 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 KLHL12Q53G59 568 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 NIPAL3Q6P499 406 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 NHLRC1Q6VVB1 395 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF540Q8NDQ6 660 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 OR9Q1Q8NGQ5 310 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 OR6X1Q8NH79 312 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZPLD1Q8TCW7 415 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ABHD3Q8WU67 409 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 PTP4A1Q93096 173 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 SNRNP40Q96DI7 357 aaKnown RBP17.66■□□□□ 0.42
PHGDH-210ENST00000641115 EMC6Q9BV81 110 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 HCAR1Q9BXC0 346 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 OR51V1Q9H2C8 321 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF696Q9H7X3 374 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 AMBNQ9NP70 447 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 RPRD1BQ9NQG5 326 aaKnown RBP17.66■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF175Q9Y473 711 aa17.66■□□□□ 0.42
PHGDH-210ENST00000641115 SLC35F4A4IF30 521 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 SLC22A20A6NK97 555 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 PTGS2P35354 604 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 GABARAPL2P60520 117 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 RPS7P62081 194 aaKnown RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF91Q05481 1191 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 RNPS1Q15287 305 aaKnown RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 OR5M9Q8NGP3 310 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 SLC25A44Q96H78 314 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 SYT4Q9H2B2 425 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 EMC3Q9P0I2 261 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 FLVCR1Q9Y5Y0 555 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 SLC22A31A6NKX4 558 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 PTGES3LE9PB15 166 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 GPR171O14626 319 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 TRMUO75648 421 aaKnown RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 AQP8O94778 261 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 IGHG1P01857 330 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 DBTP11182 482 aaKnown RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 HTR1FP30939 366 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 SLC25A1P53007 311 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 RUNX1T1Q06455 604 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 LGALS3BPQ08380 585 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 APOFQ13790 326 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 GTF2IRD2BQ6EKJ0 949 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 GTF2IRD2Q86UP8 949 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 MCEMP1Q8IX19 187 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 OR2T4Q8NH00 348 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 ZNF385AQ96PM9 386 aaKnown RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 KCNK17Q96T54 332 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 DDOQ99489 341 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 NMNAT2Q9BZQ4 307 aa17.65■□□□□ 0.42
PHGDH-210ENST00000641115 VSX1Q9NZR4 365 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-210ENST00000641115 IGKV3D-15A0A087WSY6 115 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 AHRRA9YTQ3 701 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 ZNHIT1O43257 154 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 AHCYL1O43865 530 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 GYPBP06028 91 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 CLUP10909 449 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 MTNR1AP48039 350 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 TDGF1P3P51864 188 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 CLRN1P58418 232 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 CAMK2DQ13557 499 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 LY6DQ14210 128 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 SF3B4Q15427 424 aaKnown RBP eCLIP17.64■□□□□ 0.412e-8■■■■■ 38.4
PHGDH-210ENST00000641115 AHSA2Q719I0 299 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 MEPCEQ7L2J0 689 aaKnown RBP17.64■□□□□ 0.41
PHGDH-210ENST00000641115 P4HA3Q7Z4N8 544 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 IPCEF1Q8WWN9 437 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-210ENST00000641115 SLX1AQ9BQ83 275 aa17.64■□□□□ 0.41
PHGDH-210ENST00000641115 ALG12Q9BV10 488 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms