RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TSSK3Q96PN8 268 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 SECISBP2Q96T21 854 aaKnown RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 NHEJ1Q9H9Q4 299 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 ZNRD1Q9P1U0 126 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 PACSIN2Q9UNF0 486 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 POLDIP2Q9Y2S7 368 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 YEATS2Q9ULM3 1422 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 PIKFYVEQ9Y2I7 2098 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 IGLV3-22A0A075B6J6 115 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 IGLV3-12A0A075B6K2 115 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 IGKV1D-13A0A0B4J2D9 117 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 RBFOX2O43251 390 aaKnown RBP eCLIP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 POLR2MP0CAP2 368 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 IGKV1-13P0DP09 117 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 NCF1P14598 390 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 DRD5P21918 477 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 PAX7P23759 505 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 LAP3P28838 519 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 GNA11P29992 359 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 RPS21P63220 83 aaKnown RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 KLRB1Q12918 225 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 PLD1Q13393 1074 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 OR5I1Q13606 314 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 DPYSL2Q16555 572 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 DMRTC1Q5HYR2 192 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 CNIH2Q6PI25 160 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 NTM-AS1Q6ZSK4 140 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 CCDC80Q76M96 950 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 STRADAQ7RTN6 431 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 BHLHA15Q7RTS1 189 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 BIVMQ86UB2 503 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 PLA2G4DQ86XP0 818 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 RIMKLAQ8IXN7 391 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 STPG2Q8N412 459 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 LINC00304Q8N9R0 145 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 GEMIN6Q8WXD5 167 aaKnown RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 CTNNBL1Q8WYA6 563 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 GABARAPL3Q9BY60 117 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 LRRN3Q9H3W5 708 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 COQ10BQ9H8M1 238 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 UGT1A7Q9HAW7 530 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 UGT1A10Q9HAW8 530 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 UGT1A8Q9HAW9 530 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 C12orf10Q9HB07 376 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 EXD2Q9NVH0 621 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 TMCO1Q9UM00 188 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 TIMM10BQ9Y5J6 103 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 TMEM14AQ9Y6G1 99 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 COL27A1Q8IZC6 1860 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-211ENST00000638889 PNPLA6Q8IY17 1366 aa1.47□□□□□ -2.17
CCDC7-211ENST00000638889 ATP8B3O60423 1300 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 TUBGCP6Q96RT7 1819 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF207O43670 478 aaKnown RBP1.46□□□□□ -2.18
CCDC7-211ENST00000638889 PRKAB2O43741 272 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 CCDC130P13994 396 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 CHI3L1P36222 383 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-211ENST00000638889 MDH1P40925 334 aaKnown RBP1.46□□□□□ -2.18
CCDC7-211ENST00000638889 NPBWR2P48146 333 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 CYB561P49447 251 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 RGS4P49798 205 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 PPT1P50897 306 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 NCBP1Q09161 790 aaKnown RBP1.46□□□□□ -2.18
CCDC7-211ENST00000638889 HES5Q5TA89 166 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 UTS2BQ765I0 119 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 TMEM123Q8N131 208 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 RBMXL1Q96E39 390 aaKnown RBP1.46□□□□□ -2.18
CCDC7-211ENST00000638889 ODF2LQ9ULJ1 636 aa1.46□□□□□ -2.18
CCDC7-211ENST00000638889 IGHV5-10-1A0A0J9YXX1 117 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 A0A1B0GVI7 797 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CIB4A0PJX0 185 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 OR5B21A6NL26 309 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 A8MUU9 505 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 PRRG1O14668 218 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 KMOO15229 486 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 POLR2DO15514 142 aaKnown RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 UPK3AO75631 287 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 DIRAS1O95057 198 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 GAPDHP04406 335 aaKnown RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 IGHV1-8P0DP01 117 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 EPB41P11171 864 aaKnown RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 FOLR1P15328 257 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CD34P28906 385 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 RPL13AP40429 203 aaKnown RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CCR8P51685 355 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CRYBB1P53674 252 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 GANABQ14697 944 aaKnown RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 RAET1LQ5VY80 246 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 NCCRP1Q6ZVX7 275 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-211ENST00000638889 MREGQ8N565 214 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CCDC110Q8TBZ0 833 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 SGK3Q96BR1 496 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 CLCC1Q96S66 551 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 RAB18Q9NP72 206 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 TAS2R3Q9NYW6 316 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 PIPOXQ9P0Z9 390 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 LAMP5Q9UJQ1 280 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 TNS2Q63HR2 1409 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 MSH6P52701 1360 aa1.45□□□□□ -2.18
CCDC7-211ENST00000638889 RPAP1Q9BWH6 1393 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms