RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SLC1A3P43003 542 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 CRISP3P54108 245 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TNK1Q13470 666 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 GABRA6Q16445 453 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZIK1Q3SY52 487 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZNF672Q499Z4 452 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 IQCCQ4KMZ1 466 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 LIN52Q52LA3 116 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 RBM48Q5RL73 367 aaKnown RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 ATAD3BQ5T9A4 648 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TSPO2Q5TGU0 170 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 FBXW9Q5XUX1 488 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 KDM4DQ6B0I6 523 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 C11orf71Q6IPW1 123 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 NHLRC1Q6VVB1 395 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 THAP5Q7Z6K1 395 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 GALNT5Q7Z7M9 940 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TMEM179BQ7Z7N9 219 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TSPYL5Q86VY4 417 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 CMIPQ8IY22 773 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZNF786Q8N393 782 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 SETD9Q8NE22 299 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 OR52P1PQ8NH57 321 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 BBS10Q8TAM1 723 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 HSD17B8Q92506 261 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 PROX1Q92786 737 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 KISS1RQ969F8 398 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 C3orf49Q96BT1 292 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 MUS81Q96NY9 551 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 MBOAT4Q96T53 435 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TRAF4Q9BUZ4 470 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 HDHD5Q9BXW7 423 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 POTEKPQ9BYX7 375 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 NELFAQ9H3P2 528 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 BCL2L10Q9HD36 194 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TIGARQ9NQ88 270 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 VNN3Q9NY84 501 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 CALML5Q9NZT1 146 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 NDUFAF4Q9P032 175 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 PDP1Q9P0J1 537 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 KIF17Q9P2E2 1029 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 MALT1Q9UDY8 824 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 GDF2Q9UK05 429 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 LAMP3Q9UQV4 416 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 LIPT1Q9Y234 373 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TRAPPC4Q9Y296 219 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZNF443Q9Y2A4 671 aaPredicted RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 HDGFL3Q9Y3E1 203 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 RNF115Q9Y4L5 304 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 PCDHGB5Q9Y5G0 923 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ENPP4Q9Y6X5 453 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 HSPE1-MOB4S4R3N1 261 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 U3KQV3 271 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 RTTNQ86VV8 2226 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 A0A0G2JPF8 293 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 LOC100130705A0A1B0GUX0 176 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 ARRDC5A6NEK1 342 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 TRIM64CA6NLI5 447 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 KIAA1324LA8MWY0 1029 aaPredicted RBP6.87□□□□□ -1.31
PNKP-229ENST00000637897 HNRNPCL2B2RXH8 293 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 HNRNPCL3B7ZW38 293 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 TNFRSF11BO00300 401 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
PNKP-229ENST00000637897 RAD51DO75771 328 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 MFN2O95140 757 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 AKR7A3O95154 331 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 OPN1SWP03999 348 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 IFNW1P05000 195 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 TFAP2AP05549 437 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 DBIP07108 87 aaKnown RBP6.87□□□□□ -1.31
PNKP-229ENST00000637897 HNRNPCL4P0DMR1 293 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 TFPIP10646 304 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 ANXA8P13928 327 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 ETS2P15036 469 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 PRKACGP22612 351 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 IL32P24001 234 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 RRM2P31350 389 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 POLR2HP52434 150 aaKnown RBP6.87□□□□□ -1.31
PNKP-229ENST00000637897 OR2B6P58173 313 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 SMIM11AP58511 58 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 SPIBQ01892 262 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 RNF220Q5VTB9 566 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 C9orf135Q5VTT2 229 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 FAHD1Q6P587 224 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 CLEC9AQ6UXN8 241 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 DTX2Q86UW9 622 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 CYP4Z1Q86W10 505 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 OFCC1Q8IZS5 231 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 HS3ST5Q8IZT8 346 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 ATG16L2Q8NAA4 619 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 GIPC3Q8TF64 312 aa6.87□□□□□ -1.31
PNKP-229ENST00000637897 SMAP2Q8WU79 429 aaPredicted RBP6.87□□□□□ -1.31
PNKP-229ENST00000637897 HDAC2Q92769 488 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms